| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_0176 |
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| Symbol | |
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| ID | 4174040 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 207418 |
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| End bp | 208056 |
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| Gene Length | 639 bp |
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| Protein Length | 212 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638053175 |
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| Product | prepilin-type cleavage/methylation |
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| Protein accession | YP_659762 |
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| Protein GI | 109896507 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2165] Type II secretory pathway, pseudopilin PulG |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACGAAAT TAGCTAGATC ACAATACCAA ACCTTTGCTA AAGGCGGCGT TCAGCGTCAG
CGAGGGTTTA CTTTAATTGA ATTGGTCATA GTCGTAGTTA TTTTAGGTTT GTTAGCTGCT
ACCGCTTTGC CGCGCTTACT TGATGTGACG GAAGAGGCTG AAGATGCCAC GGTCGAGGGG
GTAGCGGGTG GCTATGCAAC GGGTGTTGGC TTAGTGCGAG CTCAGTGGGA AATTGAAGGG
CGGCCGAAGG AAAACTTTGC CACTAATCTA AGTTTTGTGA CCATCGACGA TATTCGTATT
GGCGTTGATC AGGATACTGG ATATCCGACA GGACAACTTG ATACTGACAG CAGTACTGAA
GATACACAGA TAAGCTTGTT AGATTGTGAG AGTATTTTTA ACTTAATCAT GCAAAGCGCG
CCAACAATTT CATCTGATTG GAATGAACGT CCGTTTGATG ATCACCGTTA TTTTACTCGC
CAAAGCGAAG GAAATGGCTC TGGGGGAAAT GATCTTTGTT ATTATTATTT AACCCAAACG
ATAAAAAACG ATACCAATGA GCCTGTTGAC AATACTGCTG GCAATGGTTT TATATACGAT
CCCCGTATCG GGCAAGTGAT TGTTTTTAGT AACAATTAG
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| Protein sequence | MTKLARSQYQ TFAKGGVQRQ RGFTLIELVI VVVILGLLAA TALPRLLDVT EEAEDATVEG
VAGGYATGVG LVRAQWEIEG RPKENFATNL SFVTIDDIRI GVDQDTGYPT GQLDTDSSTE
DTQISLLDCE SIFNLIMQSA PTISSDWNER PFDDHRYFTR QSEGNGSGGN DLCYYYLTQT
IKNDTNEPVD NTAGNGFIYD PRIGQVIVFS NN
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