| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_0155 |
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| Symbol | |
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| ID | 4172642 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 186821 |
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| End bp | 189145 |
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| Gene Length | 2325 bp |
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| Protein Length | 774 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 638053154 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_659741 |
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| Protein GI | 109896486 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0214646 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAACAC TAAACTATTC GAGCATATCT ACCGCGATCA CGCTTGGCCT CGCCAGTATA
AGTGGCTTGG CCAGTATTCG CGCCCACGCT GATGTATTAG AAGTCATAGA AGTGACCGCA
CAAAAACGCA CCCAAAGCGT TCAAGAAGTG GGCATTTCAA TCACCGCGTT CAGTGGCGAT
CAAATTGACG CATTAGGCTA CGATAACGCC CAAGAAGTGA CCGCCATGGC GCCAGGGGTT
ACAGCCATTC AGCCCAATGG CCCTTCCGCG TTTTACATCA ATATTCGTGG TGTGGCGCAG
AATGACTTTT CGGGTGATCA TCAAGAATCC CCCGTGGCAG TGTACCTAGA TGAAGCGTAT
ATCAGTGCCT CTTCAGGGGC AGGATTCCAG TTATTTGACA TCGAGCGAGT CGAAATACTC
AAAGGGCCAC AAGGCACCTT ATTTGGCAGA AATGCGACGG GGGGCTTGGT ACATTACATA
TCACGTAAAC CCACCGACAC CTTCGAAGGA TACGGTAAGG TTACCCTAGG CAGCTATAAC
CAAGTCCTCA CCGAAGGTGC CATAGGCGGC GCACTCACTG ACACCCTCTT CTCTCGCTTC
TCATTCACCA CCAATAATCA CGACCCCTAC ATCAACAACA CTTTAGGTAA AGATCTCAAC
AATGGCGACG ACTGGGCTGC ACGCCTACAG TTTTTGCTTG AAGTCACAGA TGACGTGGAA
TGGTTAGTCA GCGCTAGACG CGGCGAACAA GATATCGACA GCGGTTTTTT TGAACACTCC
AGTGCTCGCC TCAATCCAGC CACAGGCTTA GGAGAGCATT TTGACGGGCC TAATTTAACT
ACCTCAGCTT ATCAAGAGCC TGATAACGGC GTGTACACAG GCTCATACGA CAGAATTGGC
TTTAACAAAG TCGAAAGCCA AGGCGTCACC AGTAATTTAC AATGGGATTT TGGCGATATT
CTGTTTACCT CCATTACTGA TATTTGGAGC TTAGAAAAAG ACTATATCGA AGATTCAGAC
GCCTCCCCGC AAGATTACTA CAACTTTTTC CTGCAATCTG ATGTTGACCA ATTCTCACAA
GAATTACGCC TAAATGGCCA AAGTGAGAAT ACCCGCTGGG TAACCGGCCT TTACTATTTA
GATATCGACG GCACCTTTGC CAATGGTGGC GAAGTTCGCG GATTCGTTGA CCAGCTTGCT
GGTGCAGGGG CAGGCACGGG GCCCGTAACC GGTGGCCCAG TGACGATTTG GACTCCTTTT
GATACCACCA CAGAAACCTA CTCGGTGTTC GCTCAAGTGG AATACGATGT AAATGAACAA
TGGACGGTGA TCGGCGGCTT GCGCTGGGCT AACGAAGAAA AGTCCATTGA TTACTCACAA
AATTACGTTG AAATCGCCAA TGGTAGCAAC CCCTCTGCGG CTAATATTGT TAACCCGGAT
CCCCTGGGAT TTGGTGGGCC GCTATTTGTG TTTAATGACG ACACCTTCGA CTTCGCTAGT
CTTGACGATG ATTACGTCAC CGCTAAAGCC GAAGTCGATT TCAGCCCAGC TAAAGGCACT
CTGTTTTATT TAAGTTATAA CCGCGGTATT AAAAGTGGCG GCTATAACGC ACCGTTGGAT
ATCACCGATT TTCTCGACGG CAACCCAGAA ACTGGTGGCC CAGAAGAAAT GAAATTCGAC
AAAGAAACGC TGCACGCCTA TGAGTTTGGT ATTAAACATC AGCTTAATTC AACTACCCGC
GTAAACGGTG CGGTGTATTA CTACGACTAC GATGATTATC AGGCTTTTCG CTTAGAGGGC
CTGACGACTT TTGTTTTCAA TACCGGTGCC AGTGTCAGCG GCGCAGAACT TGAAATCACC
TCAAACCCTA TAGACAACCT CGACTTGTTA CTGGGCGTAA GTTACGTCGA CAACAACGTT
GAAGACGCTT ATCAATTACC TAATGGTGAT TTAATCGACC GCCGTGCGGT GGTCACCCCA
GAGTGGAATA TTAACGGCTT AGCCCGCTAT GGCTGGCAGC TCGCGGATGG CGAGTTAGCC
GCGCAAATTG ACTTCGTCTA TATGAGCGAA CACTACTTTC AATTGAAAAA TTCCCCCGTG
GGCGAGCAAA GCAGCTATGC CCTTTTCAAT GCCCGAGTGT CTTACACCTC TGATGATGGC
AAATGGGTAT TCGCGGGTTT TGTAGACAAT CTATTAGACA AAGAATACCG CGTGATGGCC
TTTGATCTAG CTGGCGGGCC CGAAGCAGGT GGTTTTGGCA TGGTCGAAAA TTATTATGGT
AAACCCAGAT GGTGGGGACT CAGTGCCACC TATAAATTCG AATAA
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| Protein sequence | MKTLNYSSIS TAITLGLASI SGLASIRAHA DVLEVIEVTA QKRTQSVQEV GISITAFSGD
QIDALGYDNA QEVTAMAPGV TAIQPNGPSA FYINIRGVAQ NDFSGDHQES PVAVYLDEAY
ISASSGAGFQ LFDIERVEIL KGPQGTLFGR NATGGLVHYI SRKPTDTFEG YGKVTLGSYN
QVLTEGAIGG ALTDTLFSRF SFTTNNHDPY INNTLGKDLN NGDDWAARLQ FLLEVTDDVE
WLVSARRGEQ DIDSGFFEHS SARLNPATGL GEHFDGPNLT TSAYQEPDNG VYTGSYDRIG
FNKVESQGVT SNLQWDFGDI LFTSITDIWS LEKDYIEDSD ASPQDYYNFF LQSDVDQFSQ
ELRLNGQSEN TRWVTGLYYL DIDGTFANGG EVRGFVDQLA GAGAGTGPVT GGPVTIWTPF
DTTTETYSVF AQVEYDVNEQ WTVIGGLRWA NEEKSIDYSQ NYVEIANGSN PSAANIVNPD
PLGFGGPLFV FNDDTFDFAS LDDDYVTAKA EVDFSPAKGT LFYLSYNRGI KSGGYNAPLD
ITDFLDGNPE TGGPEEMKFD KETLHAYEFG IKHQLNSTTR VNGAVYYYDY DDYQAFRLEG
LTTFVFNTGA SVSGAELEIT SNPIDNLDLL LGVSYVDNNV EDAYQLPNGD LIDRRAVVTP
EWNINGLARY GWQLADGELA AQIDFVYMSE HYFQLKNSPV GEQSSYALFN ARVSYTSDDG
KWVFAGFVDN LLDKEYRVMA FDLAGGPEAG GFGMVENYYG KPRWWGLSAT YKFE
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