| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_0154 |
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| Symbol | |
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| ID | 4172641 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 185095 |
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| End bp | 186795 |
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| Gene Length | 1701 bp |
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| Protein Length | 566 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638053153 |
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| Product | AMP-dependent synthetase and ligase |
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| Protein accession | YP_659740 |
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| Protein GI | 109896485 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCCTTA AACAAAGCTA TATATGTGGT AAAGCTGACT CCCAGCTGAT TTACCAAACC
ATTGGCGAAT ATTTTGATTA CATCAGCCAA AAACATGCAG ACAGCGAAGC CTTGGTGGTT
GCCCATCAAG ACGTTCGTTG GACATACGCC ACCCTCAAAC AAAAGGTAGA CGAGTTAGCC
ACCGGCCTAC TCGCCCTTGG CATAGGAAAG GGCGATCGCG TGGGTATCTG GGGGCCCAAC
TCTTTTGAAT GGACAGTCAC CCAATTTGCC ACGGCAAAAA TTGGTGCGAT CATGGTGTGC
CTCAATCCTG CTTATCGCTT GCGTGAATTA GAATATGCAT TGAACAAGGT TGAGTGCAAA
GCGATCGTCT GTGCCGAACA GTTTAAGAGC AGCTGTTACC CAGAAATGTT GCAACAGCTT
ATACCTGAAT TAGCTCGTTG TGACGCCAGC AATATTCAAT GTGCTGCCGC ACCACACTTA
CGCAATATCA TTAAGATGGG CAACAGCACT GTACCTGGCA TGCTCAATTA TGAGCGCGTG
ACCCAAATGG GTGGTGATGC TGAGCGAAAT CAAATGGCAA CAATTACTAG TCAGTTGCTG
CCTGACGATC CCATCAACAT TCAATTTACC AGTGGCACTA CTGGGCAGCC TAAGGGGGCC
ACCTTAACCC ATTGCAATAT TCTCAATAAT GGCTTTTTGG CCGGTGAAGG CATGCGCCTA
AGCCCTAATG ACCGAGTATG TATACCGGTT CCCCTTTATC ATTGTTTTGG CATGGTATTG
GGTAATTTAT CTTGTATCGC CCATGGTGCC ACCATGATTT ACCCCAACGA TGCGTTCGAT
CCGTTAACCA CATTGCAAGT GGTTGAAAAG GAGCGCTGTA CTGCATTGCA TGGTGTGCCC
ACCATGTTTA TATCAGAGCT CGATCATGCA GATTTTAAGC AATTTGATTT ATCTAGCTTA
CGCACCGGCA TTATGGCGGG GTCATTGTGC CCTGCTGAAG TTATGAAGCG GGTGATCAAT
GAAATGCACA TGGAACATGT GCTCATCGGC TATGGGCAAA CTGAACTTAG CCCGCTGAAT
CATTTAACCC TACCAGAAGA CCCATTACAA AAACGAGTAG AAACCGTAGG CCGTGTGATG
TCTCGCATCG AGGTTAAACT TGTAGATGAA TACAACCGGG TAATTCCTAT TGGTGAGCGC
GGCGAAGTGT GTACACGCGG ATATTCTGTG ATGCGTGGTT ACTGGAACGA CCCAATTCGC
ACAGCTGAAA CCATAGATGC AGGCGGTTGG CTGCACTCAG GTGATATTGG CATCATGGAT
GAAGATGGCT ACGTCACCAT AGTCGGTCGC AGTAAAGACA TGATTATTCG CGGCGGAGAG
AATATTTACC CCAAAGAAAT AGAAGAATTC TTATACACAC ACCCTGCCGT ACAAGACATA
CAAGTATTCG GCATCGCCCA CACGGACTTT GGTGAAGAGG TATGTGCTTG GATCTGCCTT
AAACCTGGCA GCAGCGCTTG TGCCACTGAA ATCACTGATT TCTGCAAGAA CCAAATCGCC
CACTTTAAAA TTCCTAAGCA CATACGGTTT GTCGAAGAGT TTCCGTTAAC GGTGACTGGC
AAGGTGCAAA AATTCAAAAT GCGCGAAGTC ATGGAGCTCG AAATTTCTCA AGTTTCACCT
CCATCTTCCC CATCAAAATA G
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| Protein sequence | MALKQSYICG KADSQLIYQT IGEYFDYISQ KHADSEALVV AHQDVRWTYA TLKQKVDELA
TGLLALGIGK GDRVGIWGPN SFEWTVTQFA TAKIGAIMVC LNPAYRLREL EYALNKVECK
AIVCAEQFKS SCYPEMLQQL IPELARCDAS NIQCAAAPHL RNIIKMGNST VPGMLNYERV
TQMGGDAERN QMATITSQLL PDDPINIQFT SGTTGQPKGA TLTHCNILNN GFLAGEGMRL
SPNDRVCIPV PLYHCFGMVL GNLSCIAHGA TMIYPNDAFD PLTTLQVVEK ERCTALHGVP
TMFISELDHA DFKQFDLSSL RTGIMAGSLC PAEVMKRVIN EMHMEHVLIG YGQTELSPLN
HLTLPEDPLQ KRVETVGRVM SRIEVKLVDE YNRVIPIGER GEVCTRGYSV MRGYWNDPIR
TAETIDAGGW LHSGDIGIMD EDGYVTIVGR SKDMIIRGGE NIYPKEIEEF LYTHPAVQDI
QVFGIAHTDF GEEVCAWICL KPGSSACATE ITDFCKNQIA HFKIPKHIRF VEEFPLTVTG
KVQKFKMREV MELEISQVSP PSSPSK
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