Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Patl_0140 |
Symbol | |
ID | 4172167 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudoalteromonas atlantica T6c |
Kingdom | Bacteria |
Replicon accession | NC_008228 |
Strand | + |
Start bp | 166737 |
End bp | 167270 |
Gene Length | 534 bp |
Protein Length | 177 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 638053139 |
Product | inorganic diphosphatase |
Protein accession | YP_659726 |
Protein GI | 109896471 |
COG category | [C] Energy production and conversion |
COG ID | [COG0221] Inorganic pyrophosphatase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTCTTA ACGATGTTCC AGCTGGTAAA AACTTACCAG AAGAAATTAA TGTAGTGATT GAAATCCCTG CGCATTCAGA TCCAATTAAA TATGAAGTGG ATAAAGACAC AGGTGCTATT TTTGTGGACC GCTTCATGGC GACCTGCATG CATTACCCCA CTAACTACGG CTATATTAAT CAAACATTGT CAGAAGATGG AGATCCAGCT GACGTACTAG TGATGACACC GTTCCCACTT CTAGCGGGTT GTGTTATCAA ATGTCGCCCT GTTGGCGTAC TAAAAATGAC TGATGAATCA GGTACCGATG CTAAAATTTT GGCGGTGCCG GTTGATAAAT TATCTACGAT TTATCGTGGC ATCAAAGACA TTGGCGACGT TGATGAGTTG ACGCTAAATC AAATTGAGCA TTTCTTCTCA CATTACAAAG ATTTAGAGCC TGGTAAGTGG GTGAAAATCG ACGGTTGGGA AAATGCTGAA TCCGCTAAAG CTGAAATCGT CAGCAGCGTT GAGCGCTATA AAACAGAAGG TTAA
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Protein sequence | MSLNDVPAGK NLPEEINVVI EIPAHSDPIK YEVDKDTGAI FVDRFMATCM HYPTNYGYIN QTLSEDGDPA DVLVMTPFPL LAGCVIKCRP VGVLKMTDES GTDAKILAVP VDKLSTIYRG IKDIGDVDEL TLNQIEHFFS HYKDLEPGKW VKIDGWENAE SAKAEIVSSV ERYKTEG
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