Gene Patl_0140 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_0140 
Symbol 
ID4172167 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand
Start bp166737 
End bp167270 
Gene Length534 bp 
Protein Length177 aa 
Translation table11 
GC content42% 
IMG OID638053139 
Productinorganic diphosphatase 
Protein accessionYP_659726 
Protein GI109896471 
COG category[C] Energy production and conversion 
COG ID[COG0221] Inorganic pyrophosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTCTTA ACGATGTTCC AGCTGGTAAA AACTTACCAG AAGAAATTAA TGTAGTGATT 
GAAATCCCTG CGCATTCAGA TCCAATTAAA TATGAAGTGG ATAAAGACAC AGGTGCTATT
TTTGTGGACC GCTTCATGGC GACCTGCATG CATTACCCCA CTAACTACGG CTATATTAAT
CAAACATTGT CAGAAGATGG AGATCCAGCT GACGTACTAG TGATGACACC GTTCCCACTT
CTAGCGGGTT GTGTTATCAA ATGTCGCCCT GTTGGCGTAC TAAAAATGAC TGATGAATCA
GGTACCGATG CTAAAATTTT GGCGGTGCCG GTTGATAAAT TATCTACGAT TTATCGTGGC
ATCAAAGACA TTGGCGACGT TGATGAGTTG ACGCTAAATC AAATTGAGCA TTTCTTCTCA
CATTACAAAG ATTTAGAGCC TGGTAAGTGG GTGAAAATCG ACGGTTGGGA AAATGCTGAA
TCCGCTAAAG CTGAAATCGT CAGCAGCGTT GAGCGCTATA AAACAGAAGG TTAA
 
Protein sequence
MSLNDVPAGK NLPEEINVVI EIPAHSDPIK YEVDKDTGAI FVDRFMATCM HYPTNYGYIN 
QTLSEDGDPA DVLVMTPFPL LAGCVIKCRP VGVLKMTDES GTDAKILAVP VDKLSTIYRG
IKDIGDVDEL TLNQIEHFFS HYKDLEPGKW VKIDGWENAE SAKAEIVSSV ERYKTEG