Gene Patl_0132 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_0132 
Symbol 
ID4172159 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand
Start bp160684 
End bp161109 
Gene Length426 bp 
Protein Length141 aa 
Translation table11 
GC content42% 
IMG OID638053131 
Producthypothetical protein 
Protein accessionYP_659718 
Protein GI109896463 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTGAAAC ACACGATAAA AAAAATATCT CTAACAGCGG CCTTGTTATT AGGCAGCGCT 
TCAGTTTTTG CTGAAGTTGT TGTTATTGTG CATCCATCTA ATAGCGCTAG CATTGATGCA
AAAACCACCC AACGAATTTT TTTAGGAAAA GAGAAGAAAT TTTCCTCTGG AGAACAAGCC
ACTCCAATTA ACCAAGCTGC AGGCACTGCA AGTCGTAATA GTTTTGATAA CGACACGCTT
GGTCGAAATT CTGCCCAAGT ATCCGCTTAT TGGTCAAAGC TAGTTTTTAC CGGAAAGGGT
ATCCCGCCCA AAGAAGTAGC CAACGATGGT GAAGTCATCG CTATTGTAGC TGCTAATCCA
AATGCCATTG GTTACGTGGA CAGTGGCTCA GTTGACGCAT CTGTAAAAGC AATTCCATTA
AACTAG
 
Protein sequence
MLKHTIKKIS LTAALLLGSA SVFAEVVVIV HPSNSASIDA KTTQRIFLGK EKKFSSGEQA 
TPINQAAGTA SRNSFDNDTL GRNSAQVSAY WSKLVFTGKG IPPKEVANDG EVIAIVAANP
NAIGYVDSGS VDASVKAIPL N