Gene Patl_0113 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_0113 
Symbol 
ID4171795 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand
Start bp128355 
End bp128924 
Gene Length570 bp 
Protein Length189 aa 
Translation table11 
GC content49% 
IMG OID638053112 
ProductGCN5-related N-acetyltransferase 
Protein accessionYP_659699 
Protein GI109896444 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1670] Acetyltransferases, including N-acetylases of ribosomal proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTCAGC AACTGGAAAC TGACAGGCTC ATATTGCGAA ACTGGAAGGC AAGCGACTAT 
GAGCCATTCT ACGCGTTAAA TTCTGACCTT GAGGCCATGC GTTATTTTCC TTCCCCCTAT
ACTCGGGCGC AAAGCGATCA CTTAGCGGAC AAATGCCAAT CTTTGATTCA GCGGCGAGGG
TGGGGTTTGT GGGCGGTGAG TGAGAAAGAG GATGAGGCGT TTATTGGCTT TGTGGGTTTG
CATACGCCAA ATGCAAACAT GCCGTGCTCC CCTTGTGTTG AGATAGGCTG GCGTCTGCTT
CCTCAATATT GGGGTAATGG CTTCGCCACT GAAGGGGCGA AAAAGGCGTT AGAATATGCG
TTTAATGAGC TGGGGCTGCC AGAGGTGGTC TCGTTTACTT CAAAAAAGAA TCAACCTTCT
CGGGCCGTTA TGGCGCGAAT TGGATTGCAA GATTCACTCA ATAACTTTAT TCACCCAGAT
ATTGCCCCTG AGCATCCGTT AGCGGAACAT GTTTTATATC ACATCACCCG AAATGCCTGG
CTTGAGCAAA CAAGTCAAAG CGGCAAGTGA
 
Protein sequence
MSQQLETDRL ILRNWKASDY EPFYALNSDL EAMRYFPSPY TRAQSDHLAD KCQSLIQRRG 
WGLWAVSEKE DEAFIGFVGL HTPNANMPCS PCVEIGWRLL PQYWGNGFAT EGAKKALEYA
FNELGLPEVV SFTSKKNQPS RAVMARIGLQ DSLNNFIHPD IAPEHPLAEH VLYHITRNAW
LEQTSQSGK