Gene Patl_0089 details

Gene Information

• Locus tag: Patl_0089
• ID: 4172861
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudoalteromonas atlantica T6c
• Kingdom: Bacteria
• Replicon accession: NC_008228
• Strand: +
• Start bp: 103110
• End bp: 103556
• Gene Length: 447 bp
• Protein Length: 148 aa
• Translation table: 11
• GC content: 45%
• IMG OID: 638053088
• Product: acetyl-CoA carboxylase, biotin carboxyl carrier protein
• Protein accession: YP_659675
• Protein GI: 109896420
• COG category: [I] Lipid transport and metabolism
• COG ID: [COG0511] Biotin carboxyl carrier protein
• TIGRFAM ID: [TIGR00531] acetyl-CoA carboxylase, biotin carboxyl carrier protein

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 0.423168
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGATATAC GCAAAATTAA GAAACTCATC GAGTTAGTAG AAGAATCAGG TATTTCTGAG 
TTAGAAATTA CTGAAGGTGA AGAATCTGTA CGAATCCATC GTAGCGGCCA GCCGGCAGCG 
CAAGTACAGT ACTCTGCCCC TATCCAACAA GCTGCACCTG TAGCAGCTGC TCCCGTCGTT 
GAAGCAGCAC CTGCAGCCGT TGCTGAAACC AGTGGACACC GTGTTAAGTC TCCAATGGTC 
GGTACTTTCT ACCGTTCATC TTCTCCAGGT TCAAAACCTT TTGCTGAAGT GGGCCAAAGC 
GTCAAAGTAG GCGACACTTT ATGTATCATC GAAGCCATGA AAATGATGAA TCAAATTGAG 
TCGGACAAAG CTGGCGTTAT CAAAGAAATC CTAATCGACA ACCAAGAGCC GGTTGAATTC 
GATCAGCCCC TATTCATCAT TGAATAA 

 

Protein sequence

MDIRKIKKLI ELVEESGISE LEITEGEESV RIHRSGQPAA QVQYSAPIQQ AAPVAAAPVV 
EAAPAAVAET SGHRVKSPMV GTFYRSSSPG SKPFAEVGQS VKVGDTLCII EAMKMMNQIE 
SDKAGVIKEI LIDNQEPVEF DQPLFIIE