Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Patl_0085 |
Symbol | |
ID | 4171786 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudoalteromonas atlantica T6c |
Kingdom | Bacteria |
Replicon accession | NC_008228 |
Strand | + |
Start bp | 100158 |
End bp | 101012 |
Gene Length | 855 bp |
Protein Length | 284 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 638053084 |
Product | hypothetical protein |
Protein accession | YP_659671 |
Protein GI | 109896416 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG2267] Lysophospholipase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.720281 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTAGCCC GCCGTTTTAA TCGTTATATC GTTAGTATGT TGTTGTCCTT GATGTGTTTC GCGTCGAGCG CTGCTACTGC CGAAACAGAA CGCGTTATTA CTCTAGAAAA TGACATGCAA GCCACCCATA CTCAGGCGCG AGGTGAGGCA ATTGCGAGTG TGTTACTCAT TCATGGCTGG GCAGGCAACA TGAATGAAGT GGGCGATATG TATAAGCGCT TAGCGGCGCA GCTGGCAGAG CAGCATATTG CCTCCCTTAG AATCAATATA CGCGGCGAAA GTGAACGCGA AAAAAGCGGA TATCGACTCA CCAGTACTTT TTCGTCTCGG GTAACCGATG CTGAAACGGG GTTGATGTTT TTACGTCAGC AATATCCTGA AACTCCCACT GGTGTGGTCG GTTTTAGTCT TGGGGGGTCG ACTACCATAA GGCTTATGGG ACTGCACCCT ACAGATATTG ACAGTGTCGT GCTGTGGTCA AGCGCGGGAG ACCCAGCGCT GGTAGGGCAA AGCATCCTAT CCCCGGCACA AATGCGTGAA GTGCTTGATA ACGGTGAAGT AAAAGTGCCT ACATGGGAAA CGCTAACCGT CACCAAAACG CATGTTTTGG GTATGATGGG GCACGACATT TATCAGAATA TTAACGCTTA TAGCGGGCCC CTGTTGTCCA TTCGAGGCAG CGAAGACTAC GTTAAACCTA TTGAGAAAAC CTTACTCCCA TTAACCTCAT CAGTACTTGC TGAGGCCCGT GTCATTCAAG GAGCGGATCA TATATTCGAT TCGTTTAACC CCGAAAGCCA ATACGATGAG CGGGTGATAA AGCAGACGTT GGACTGGTTA ATCGATACGC TCTAA
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Protein sequence | MLARRFNRYI VSMLLSLMCF ASSAATAETE RVITLENDMQ ATHTQARGEA IASVLLIHGW AGNMNEVGDM YKRLAAQLAE QHIASLRINI RGESEREKSG YRLTSTFSSR VTDAETGLMF LRQQYPETPT GVVGFSLGGS TTIRLMGLHP TDIDSVVLWS SAGDPALVGQ SILSPAQMRE VLDNGEVKVP TWETLTVTKT HVLGMMGHDI YQNINAYSGP LLSIRGSEDY VKPIEKTLLP LTSSVLAEAR VIQGADHIFD SFNPESQYDE RVIKQTLDWL IDTL
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