Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Patl_0084 |
Symbol | dipZ |
ID | 4171785 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudoalteromonas atlantica T6c |
Kingdom | Bacteria |
Replicon accession | NC_008228 |
Strand | + |
Start bp | 98333 |
End bp | 100111 |
Gene Length | 1779 bp |
Protein Length | 592 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 638053083 |
Product | thiol:disulfide interchange protein precursor |
Protein accession | YP_659670 |
Protein GI | 109896415 |
COG category | [C] Energy production and conversion [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG4232] Thiol:disulfide interchange protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGTTAA TAGCATCGTT TTCCATTTTT ATGCTCATGT CCATTTGGTC ATTCGCCAGC TTAGGCCAAA GCAATTCCTT CGATTCTTTG TTTAGCAATG AACCTGAGTT TCTAAAGGTG GATCAAGCTT TCGTGTTTGA TTATGTGCAA AATGGTGACC AACTAGTGGT CACTTGGGAC ATTGCCGATG ACTACTACCT TTATCAGCAA CAATTCAAAG CCGTTTCGAA AAACGCCTCG TTAGGTGAGC CTATTTTTCC TACAGGAAAA ATGAAAGAGG ATGAATTTTT TGATGAGCCT CAAGAAGTTT ATTACCACAA GGTCTCAGTC ACCTATCCTA TCCTACAGTC ACAAGATGAT TCTGCGGTTA AAATTCGCTA CCAAGGCTGT GCAGAAGCGG GACTGTGTTA CCCCCCAACA ACGCAGGTCG TTTATCTAAA TGCAGTCAAT GCCAGTGATG ATCTTTCTAA TACCGACGAA GCTAGTGTTG AAAGTAGCGG CTCTGTCTCA CAACAATTTG AGCTGGCAGA TTTACTCACG GGCGACCAGA GCCTGATATG GGTGTTATTA ATATTTCTAG CGTTAGGTGT GGGCCTAGCG TTTACTCCGT GTGTCTTCCC TATGTATCCG ATCTTATCTG GCATAGTCAT AGGTCAAGGG AAGAGTATCA GTACATCGCG AGCGTTCGTT CTATCCTTTG TGTACGTGCA AGGTATGGCG TTGACGTACT CTTTACTGGG GTTAGTTGTT GCATCGGCGG GCGTGCAGTT TCAAGCGGCG TTGCAGCATC CCATTATATT AGGTGCGTTG ATCGTCGTTT TTGCACTGCT GGCGTTGGTG ATGTTCGGTG CTTGGGAATT TCAGCTACCC TCAAGCTGGC AAGAAAAGCT CAATGGCGTG AGTAACCAAC AGAAAAGTGG AAGTTACTTA GGCGTGCTTT TGATGGGGGC AATATCAGGG CTGGTTGCAT CCCCGTGTAC CACCGCGCCG TTAACCGGAA TATTATTGTA CATAGCGCAA ACGAGCGATT TATTGCTGGG CTTCAGTGCA CTTTATGCAC TAAGTTTGGG CATGGGAATA CCATTGATAT TGTTTGGCAT AACAGGCGGT AAATTACTGC CTAAAGCAGG TGCATGGATG AACATCATCA AAGTCACTTT TGGCTTCATG ATGCTGGCCG TCGCGTTAAT GTTTGTAGAG CGTTTAGTCA GCCATATGGC AACAGATATT TTGTGGTCGT TGTTAGGGCT AGTGACTTTT AGCTATTTTT ATGTGATGAA TCAAGCCAGT TCAGTGACCT TTGGTAAGGG TGTTCGCGCG CTAGTTATTT TTATCGGTTT GTTTGCGTCT GCCATGTATG GCTATCAGAC TATTTTTGGC CAGACATCGT CTGTTGCCGG GCATACAGAA CAAAGCCATC CTCGGTTTGA AGTGGTTAAA AACCTTGATG ATTTTGAGCA AAAATTAGCT GCTGCCAACG CGCAAGGTAA AACCGTGATG GTCGATTTAT ATGCGGACTG GTGTGTTGCC TGTAAAGAGT TCGAAAAATA CACCTTTCCT GATACGCAAG TGGTAGACGC GCTTAGTAAC ACTGTGTGGA TGCAAATTGA TTTAACCGAT AACACGGCGA CTAACATTGC ATTTCAAGAG CATTTTTCAA TTTTAGGCTT GCCGACTATC TTGTTCTTTG ATCTGCAAGG TAAAGAGATT AGCGGCTCTC GGGTCACCGG ATTTATGCAA GCGTCAGCGT TTGCCGCCCA TGCAAAAAAT ATCTTATAA
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Protein sequence | MKLIASFSIF MLMSIWSFAS LGQSNSFDSL FSNEPEFLKV DQAFVFDYVQ NGDQLVVTWD IADDYYLYQQ QFKAVSKNAS LGEPIFPTGK MKEDEFFDEP QEVYYHKVSV TYPILQSQDD SAVKIRYQGC AEAGLCYPPT TQVVYLNAVN ASDDLSNTDE ASVESSGSVS QQFELADLLT GDQSLIWVLL IFLALGVGLA FTPCVFPMYP ILSGIVIGQG KSISTSRAFV LSFVYVQGMA LTYSLLGLVV ASAGVQFQAA LQHPIILGAL IVVFALLALV MFGAWEFQLP SSWQEKLNGV SNQQKSGSYL GVLLMGAISG LVASPCTTAP LTGILLYIAQ TSDLLLGFSA LYALSLGMGI PLILFGITGG KLLPKAGAWM NIIKVTFGFM MLAVALMFVE RLVSHMATDI LWSLLGLVTF SYFYVMNQAS SVTFGKGVRA LVIFIGLFAS AMYGYQTIFG QTSSVAGHTE QSHPRFEVVK NLDDFEQKLA AANAQGKTVM VDLYADWCVA CKEFEKYTFP DTQVVDALSN TVWMQIDLTD NTATNIAFQE HFSILGLPTI LFFDLQGKEI SGSRVTGFMQ ASAFAAHAKN IL
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