Gene Patl_0084 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_0084 
SymboldipZ 
ID4171785 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand
Start bp98333 
End bp100111 
Gene Length1779 bp 
Protein Length592 aa 
Translation table11 
GC content45% 
IMG OID638053083 
Productthiol:disulfide interchange protein precursor 
Protein accessionYP_659670 
Protein GI109896415 
COG category[C] Energy production and conversion
[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG4232] Thiol:disulfide interchange protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGTTAA TAGCATCGTT TTCCATTTTT ATGCTCATGT CCATTTGGTC ATTCGCCAGC 
TTAGGCCAAA GCAATTCCTT CGATTCTTTG TTTAGCAATG AACCTGAGTT TCTAAAGGTG
GATCAAGCTT TCGTGTTTGA TTATGTGCAA AATGGTGACC AACTAGTGGT CACTTGGGAC
ATTGCCGATG ACTACTACCT TTATCAGCAA CAATTCAAAG CCGTTTCGAA AAACGCCTCG
TTAGGTGAGC CTATTTTTCC TACAGGAAAA ATGAAAGAGG ATGAATTTTT TGATGAGCCT
CAAGAAGTTT ATTACCACAA GGTCTCAGTC ACCTATCCTA TCCTACAGTC ACAAGATGAT
TCTGCGGTTA AAATTCGCTA CCAAGGCTGT GCAGAAGCGG GACTGTGTTA CCCCCCAACA
ACGCAGGTCG TTTATCTAAA TGCAGTCAAT GCCAGTGATG ATCTTTCTAA TACCGACGAA
GCTAGTGTTG AAAGTAGCGG CTCTGTCTCA CAACAATTTG AGCTGGCAGA TTTACTCACG
GGCGACCAGA GCCTGATATG GGTGTTATTA ATATTTCTAG CGTTAGGTGT GGGCCTAGCG
TTTACTCCGT GTGTCTTCCC TATGTATCCG ATCTTATCTG GCATAGTCAT AGGTCAAGGG
AAGAGTATCA GTACATCGCG AGCGTTCGTT CTATCCTTTG TGTACGTGCA AGGTATGGCG
TTGACGTACT CTTTACTGGG GTTAGTTGTT GCATCGGCGG GCGTGCAGTT TCAAGCGGCG
TTGCAGCATC CCATTATATT AGGTGCGTTG ATCGTCGTTT TTGCACTGCT GGCGTTGGTG
ATGTTCGGTG CTTGGGAATT TCAGCTACCC TCAAGCTGGC AAGAAAAGCT CAATGGCGTG
AGTAACCAAC AGAAAAGTGG AAGTTACTTA GGCGTGCTTT TGATGGGGGC AATATCAGGG
CTGGTTGCAT CCCCGTGTAC CACCGCGCCG TTAACCGGAA TATTATTGTA CATAGCGCAA
ACGAGCGATT TATTGCTGGG CTTCAGTGCA CTTTATGCAC TAAGTTTGGG CATGGGAATA
CCATTGATAT TGTTTGGCAT AACAGGCGGT AAATTACTGC CTAAAGCAGG TGCATGGATG
AACATCATCA AAGTCACTTT TGGCTTCATG ATGCTGGCCG TCGCGTTAAT GTTTGTAGAG
CGTTTAGTCA GCCATATGGC AACAGATATT TTGTGGTCGT TGTTAGGGCT AGTGACTTTT
AGCTATTTTT ATGTGATGAA TCAAGCCAGT TCAGTGACCT TTGGTAAGGG TGTTCGCGCG
CTAGTTATTT TTATCGGTTT GTTTGCGTCT GCCATGTATG GCTATCAGAC TATTTTTGGC
CAGACATCGT CTGTTGCCGG GCATACAGAA CAAAGCCATC CTCGGTTTGA AGTGGTTAAA
AACCTTGATG ATTTTGAGCA AAAATTAGCT GCTGCCAACG CGCAAGGTAA AACCGTGATG
GTCGATTTAT ATGCGGACTG GTGTGTTGCC TGTAAAGAGT TCGAAAAATA CACCTTTCCT
GATACGCAAG TGGTAGACGC GCTTAGTAAC ACTGTGTGGA TGCAAATTGA TTTAACCGAT
AACACGGCGA CTAACATTGC ATTTCAAGAG CATTTTTCAA TTTTAGGCTT GCCGACTATC
TTGTTCTTTG ATCTGCAAGG TAAAGAGATT AGCGGCTCTC GGGTCACCGG ATTTATGCAA
GCGTCAGCGT TTGCCGCCCA TGCAAAAAAT ATCTTATAA
 
Protein sequence
MKLIASFSIF MLMSIWSFAS LGQSNSFDSL FSNEPEFLKV DQAFVFDYVQ NGDQLVVTWD 
IADDYYLYQQ QFKAVSKNAS LGEPIFPTGK MKEDEFFDEP QEVYYHKVSV TYPILQSQDD
SAVKIRYQGC AEAGLCYPPT TQVVYLNAVN ASDDLSNTDE ASVESSGSVS QQFELADLLT
GDQSLIWVLL IFLALGVGLA FTPCVFPMYP ILSGIVIGQG KSISTSRAFV LSFVYVQGMA
LTYSLLGLVV ASAGVQFQAA LQHPIILGAL IVVFALLALV MFGAWEFQLP SSWQEKLNGV
SNQQKSGSYL GVLLMGAISG LVASPCTTAP LTGILLYIAQ TSDLLLGFSA LYALSLGMGI
PLILFGITGG KLLPKAGAWM NIIKVTFGFM MLAVALMFVE RLVSHMATDI LWSLLGLVTF
SYFYVMNQAS SVTFGKGVRA LVIFIGLFAS AMYGYQTIFG QTSSVAGHTE QSHPRFEVVK
NLDDFEQKLA AANAQGKTVM VDLYADWCVA CKEFEKYTFP DTQVVDALSN TVWMQIDLTD
NTATNIAFQE HFSILGLPTI LFFDLQGKEI SGSRVTGFMQ ASAFAAHAKN IL