| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_0080 |
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| Symbol | glgA |
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| ID | 4171781 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 93048 |
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| End bp | 94478 |
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| Gene Length | 1431 bp |
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| Protein Length | 476 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638053079 |
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| Product | glycogen synthase |
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| Protein accession | YP_659666 |
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| Protein GI | 109896411 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0297] Glycogen synthase |
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| TIGRFAM ID | [TIGR02095] glycogen/starch synthases, ADP-glucose type |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.572578 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGTAT TATTCGTTGT ATCTGAGGTT GAAGATCTGG TTAAAACGGG TGGGCTGGCA
GATGTCGCTA AAGCGCTCCC CATTGCATTA AGCGAAATGG GCCACGAAGT GTGTATTGTT
ATGCCTTACT ACAAAATGTT GGCAGAGCAA CACCCCGGTG AAGACTGCGC TGAGCCTCAG
GCACTTTTTG CCAGCCGCAA ACCCTACGAT TTTACGATTA AACGTCTACA GATTGGCAAT
GTGCCTGTTT ACGCAATAGA TTACCCAGCT TACTTTGCAC GTGATGGGTT ATATTCTGAT
AGCTATCACG CTTATCCTGA TAACGCTGAG CGTTTTGCTT TTTTTGCCCA AGGCGCATTA
CAAGTCGCTA AAGCGTTAGA TTTCCAGCCA GATATTGTGC ATTGCAACGA TTGGCATACG
GCGCTAACGC CTTATTTTAT GAGCATTGAT GACAGTGGTT TCTTTGATCG AAGTCGCAGC
ATCTTTACTA TTCACAATGG CGCATATCAG GGCACACATC GTTTTTCAGA TATTCCTTTT
TTGCAGCCGC ATTATTTACT TCATTCGCAA TTAGACGGTG ATGCGTTGAA TTTTGTACGC
ATGGGTATTC GCTATGCGCA TAAAATTAAT GCGGTGAGTC CAAATTATGC TCAAGAACTG
TTAACACCTT TGGGCTCGCA TCATTTGTAC CATGAGTTTC AGCAGCGCCG GAATGATCTA
AGCGGTATTC TAAATGGTTG TGACTACACC CAGTGGGATC CCATCAATGA CCCGCATATT
ATTCAAACCT ATACCGCTGA TGATATGAGC GGTAAAGAGA AGTGCAAAAT TGATTTACAG
CGAGAAGCAC AAATACCGCA AGATTTGGGT ATACCGCTGG TGGGCATGGT CTGTCGATTA
ACTGAACAAA AAGGGTTTGG CTACATACTA CCTATGCTTG AGCAACTCAT GCAGCATAAT
GTTCAGTTGG TGATTATTGG CACTGGCGAC CCGCAAATAA GCCATACATT GCGCAGTGTT
GCACAGCGAC ACCCAGAAAA GCTCGCGTTT ATCGAAGCAT TCAGTGTACA AAAAGCCCAT
ATGCTCGAAG CGGGCAGTGA CTTTTTCTTA ATGCCATCAT TATTCGAGCC TTGCGGCCTA
AATCAAATGT ATAGCCTTGC CTTTGGTACC TTGCCAATTG TACGTGGGGT TGGAGGTTTA
AAGGATACTG TTACTGACCT TGCAGATAAC CCAGAGCAAG CAACTGGCTT CGTGTTCGAG
CATCCAGACA GCGACGCCTT GCTTGCCTGT ATTCAACGCG CGCTATTGTT CTACCGTGAA
TATCCAGAGC GTTTTAAAGC TACGCAAATG CGTGCCATGC ACAGCCGATT CACTTGGCAG
CAAGCTGCCC AGCAGTATTT AGCTTTATAC CATGAAGCAA TTGGCGGTTA A
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| Protein sequence | MKVLFVVSEV EDLVKTGGLA DVAKALPIAL SEMGHEVCIV MPYYKMLAEQ HPGEDCAEPQ
ALFASRKPYD FTIKRLQIGN VPVYAIDYPA YFARDGLYSD SYHAYPDNAE RFAFFAQGAL
QVAKALDFQP DIVHCNDWHT ALTPYFMSID DSGFFDRSRS IFTIHNGAYQ GTHRFSDIPF
LQPHYLLHSQ LDGDALNFVR MGIRYAHKIN AVSPNYAQEL LTPLGSHHLY HEFQQRRNDL
SGILNGCDYT QWDPINDPHI IQTYTADDMS GKEKCKIDLQ REAQIPQDLG IPLVGMVCRL
TEQKGFGYIL PMLEQLMQHN VQLVIIGTGD PQISHTLRSV AQRHPEKLAF IEAFSVQKAH
MLEAGSDFFL MPSLFEPCGL NQMYSLAFGT LPIVRGVGGL KDTVTDLADN PEQATGFVFE
HPDSDALLAC IQRALLFYRE YPERFKATQM RAMHSRFTWQ QAAQQYLALY HEAIGG
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