Gene Patl_0068 details

Gene Information

• Locus tag: Patl_0068
• ID: 4171768
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudoalteromonas atlantica T6c
• Kingdom: Bacteria
• Replicon accession: NC_008228
• Strand: +
• Start bp: 78268
• End bp: 80214
• Gene Length: 1947 bp
• Protein Length: 648 aa
• Translation table: 11
• GC content: 45%
• IMG OID: 638053066
• Product: methyl-accepting chemotaxis sensory transducer
• Protein accession: YP_659654
• Protein GI: 109896399
• COG category: [N] Cell motility; [T] Signal transduction mechanisms
• COG ID: [COG0840] Methyl-accepting chemotaxis protein

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGTAACT TAGTGGGCAC TATTTGCCAT CCGGCCAAAA CGTTAATGTC GCAATTTCGT 
TATTCAGTCA AATTTACCAT TATCAGTTTT ATTTTTCTGG TACCACTGAT TTTAAGCTTA 
GCGTTGCTGC AATATGAGTA TGGCGATGAT ATTCGTTTTA TGAGCAAAGA ACGCCAAGGC 
GTAGCGCTTG TTAGTGCACT GCAAGATGAA CAACATGCAT TGGCGGTGAG CCTCATTGAT 
ACCCATTCTT CGTTCACCAC TTCCCTAAGC GATCATCAGG CATCTCTGAG CGCCTTGGCA 
TCTAAGCGCG TGAATAGCGC TGCTGAACAT TATCAACAAG CCTTGGAAAA GGCAGATTTG 
CAAGAGGCGA TTAAATCTCT TGCTGGTTTA TCTCAAGCGA TTGCCGACGC CACTAACCTA 
GAGTTAGATT TGGCGTTGGA TACCAGCTAT TTGATTACTA CCTTGGTGCG CAGCTTACCG 
TTAATGCAAG ATCAATTGTC CATGACCGCC GCGTTAGCGT TAAAGGTGAC TCAAGCCGGT 
AGCTTTACCC CTGATACCTA CATTGGCTTG TCTAACGCAA ATCAAAAACT ACCTGTTATG 
CTAAAAGGAC TTGAGCAAAG TATTCAAGTA AGTTTGCAAG CTAATCAAGA GATTGAAAAA 
ACGGCAGGGG AGCAATGGTT ATCGCTGCAG CGCAATTTAG TCGCATATCA GCGCACTGTT 
CAGCAGCAAA TTCTTGATCC AGATAATATC AATATCGCTA CCAATACGTT GCTTTTGTCG 
AGCACATCAC TCAATCAGCA ACTGAGTGAC TTTGCTACTT CTCTCGTGCC GATCCTTGAT 
GGTTTGCTGG AACACAGAAT TGAGCAAGCG CAGTTTAAAA ACAATGTGAT TTTGAGCGTC 
TCAGTGATTG CGGTATTGCT AGCCGTGTAT TTATTTATCG GCATGTATTT GTCCGTTACT 
GAGAACATTA AAAACGTAGT GCATGCGGTG CACAGTGTCG CTGATGGGGA TTTAAGTTCA 
AGAGTCAGCG TGTCAGGCAA AGATGAAATG CGTGATATCG CCAGTGATAT GAATCACATG 
ACTGAGAACT TACAAACATT AGTTGCTCGC ATCAGTGATG CGATAGATGC CCTGAGCCAA 
TCTGCTCTAA ATTTGAAAGG GATCACAGCA AAAACCAAAG TCGATGTAAC GGAGCAAAAA 
TCCGGCACCG AACTTATTTC TCACTCCATG ACACAATTGA CCGAAGTGGC ACAAGCCGTG 
GATAACAACT CAGGTACTGC CACCGAATCA GCTGAGGTTG CCCACAATGA AGCGCAGCAG 
GGCAAGCAAC TCGTTAGTCG CTTACAATCA GTGATGCGTG ATATGCAAAC GGAGTCTAGC 
CGCTCACAAG AAGCGTTAAA TAGATTGGTG GAAGACAGCA AAAATATAGG TCAGGTATCC 
AGTGCGATTA ACGGAATTGC TGAACAAACT AATTTACTGG CGCTAAACGC CGCAATCGAA 
GCCGCACGGG CGGGGGAGCA TGGTCGGGGT TTTGCGGTCG TAGCAGATGA AGTGAGAACG 
TTGGCTCAAC GCACGCAAGA CCAAACGAAT CAAATTCATG ACATCATTAG CAAGCTACAA 
CAAGCAACAA AAGACACCGA GCTGAGCATG GAGCAAAGCC GTGTTCAAAT GGATGTCAGC 
GTTGAAGAAA GCGCTGTGGT TGAAGCATCC TTACAGCGTA TCACTGAGGT GATAAGCACC 
ATTAATGATA TGAGCGGTGA AATTTCACAT TTGGCAACAC AGCAGTCTGA CGTAACCTGC 
TCTGTTGCAT CGCAAGTGGC CGAGATAACG GCGATTTCTG AGTCCACTAT GCGTGGGGCT 
CAGGAGACTG AACATTCAGC AGAAGATTTA CTCGTTGTGG TCAACAGCCT TAAAAACGAG 
TTGGGCCAAC TACAAAAGGG CCGTTAA 

 

Protein sequence

MSNLVGTICH PAKTLMSQFR YSVKFTIISF IFLVPLILSL ALLQYEYGDD IRFMSKERQG 
VALVSALQDE QHALAVSLID THSSFTTSLS DHQASLSALA SKRVNSAAEH YQQALEKADL 
QEAIKSLAGL SQAIADATNL ELDLALDTSY LITTLVRSLP LMQDQLSMTA ALALKVTQAG 
SFTPDTYIGL SNANQKLPVM LKGLEQSIQV SLQANQEIEK TAGEQWLSLQ RNLVAYQRTV 
QQQILDPDNI NIATNTLLLS STSLNQQLSD FATSLVPILD GLLEHRIEQA QFKNNVILSV 
SVIAVLLAVY LFIGMYLSVT ENIKNVVHAV HSVADGDLSS RVSVSGKDEM RDIASDMNHM 
TENLQTLVAR ISDAIDALSQ SALNLKGITA KTKVDVTEQK SGTELISHSM TQLTEVAQAV 
DNNSGTATES AEVAHNEAQQ GKQLVSRLQS VMRDMQTESS RSQEALNRLV EDSKNIGQVS 
SAINGIAEQT NLLALNAAIE AARAGEHGRG FAVVADEVRT LAQRTQDQTN QIHDIISKLQ 
QATKDTELSM EQSRVQMDVS VEESAVVEAS LQRITEVIST INDMSGEISH LATQQSDVTC 
SVASQVAEIT AISESTMRGA QETEHSAEDL LVVVNSLKNE LGQLQKGR