| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_0057 |
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| Symbol | |
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| ID | 4171891 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 67034 |
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| End bp | 68350 |
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| Gene Length | 1317 bp |
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| Protein Length | 438 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638053055 |
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| Product | three-deoxy-D-manno-octulosonic-acid transferase-like |
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| Protein accession | YP_659643 |
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| Protein GI | 109896388 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1519] 3-deoxy-D-manno-octulosonic-acid transferase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.551784 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGAAGT CCACTTTCAC TCCTAAAGCA AAAGAAAATT ACAGCCTGTG GGGATACACC
TTGCTGTTGT GTATTTTGTT ACCCTTTGTG TTTTTACATT TTTGTTATCA ATACTTGACG
AAAAAACCTA CCACGCCTTG GGCTCGGATC CAACGCTTTG GTGTGAATAT ATGCACGGCA
AAAACTGGTG GGTTGCTCTT TCATTGTGTG TCAGTAGGTG AGGTGGTTGC CGCTGCCAAT
GTCATTAAAA GAATTCGCCA ATTTCAACCT GAGATACCTG TCACTATTAC TACTACAACG
GCGACTGGTG CAAAGCAAGC GACCGACTTA TTCAACGACT CAATCACTCA TTGCTATTTG
CCAATCGATA TTCCATGGAT GATGCGCCGC ATCCTTAAGC AAGCCGCGCC CACTCACGTC
ATCATTACTG AAGTGGAGCT TTGGCCGAAT ATGATCGACC AATGTTGGCG TCTAAATATT
CCCGTGTCGG TGATTAATGC ACGTATGACT GACAGCTCTA TGCGCACATA TGCCAAAATA
TCGGCTCTTT TTAGCCCCAT GCTGCATAAA TTACATAAAG TTTGCGCCCA AGGAGAGCGC
GACTACCACA ACTACCAGCA ACTCCATGCT CCTGAGCAAA CGTTGGTACT GACCAATAAT
ATTAAGTTTG AGCAGCCTGC TCGTCCCGAA GCTCACCAGC AGGCCAAAGA ATTTTCTCAG
ATGTTCAATA TTGCAAGTCG GCCGATTATT GTCGCTGGTA GCTCTCACGC TCCAGAAGAA
GATGTACTCC TTGATGCTCA CAAATTAATT CTGCAACACA TTCCTGACGC ACTGCTTATC
ATAGTACCTC GCCACCCCCA GCGTTTTGAC GATGTCTATC AGATATGTAA ATTAAGTGGC
TTATGCAGCC TGCGAAGCTC TGACGAAAGG CCTTGTGATA CAGACACCCA AGTCTTGCTA
GTTGATGAAA TGGGCAAACT GCAAGCCTTG TATGCTCTGG CTACAATTGC CTTTGTAGGG
GGCAGTATTG CAGATAGAGG CGGGCATAAC GCCCTTGAAC CTGCGGCCTT TGAAGTCCCC
ATATTGATGG GAGTGCACCG GTATAACAAC CCAGCAATAT GCCAAGTGCT CAGTGACAAT
GGCGCGTTAT TCGAAGCTAA TACCCCAGAA CAAATAAGCC AAAAAGTCAT GCTGTGGTTA
AGGAATGAGA CACTACGTAA ACATGCAGGC AAAGCAGGAA AACAAGTTTT ACAGGAAAAC
AGTGGCGCTG TTAGCGCCAC GTTGCAGGCG TTAGGATTTG CTATGAGCAA TCATTAA
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| Protein sequence | MMKSTFTPKA KENYSLWGYT LLLCILLPFV FLHFCYQYLT KKPTTPWARI QRFGVNICTA
KTGGLLFHCV SVGEVVAAAN VIKRIRQFQP EIPVTITTTT ATGAKQATDL FNDSITHCYL
PIDIPWMMRR ILKQAAPTHV IITEVELWPN MIDQCWRLNI PVSVINARMT DSSMRTYAKI
SALFSPMLHK LHKVCAQGER DYHNYQQLHA PEQTLVLTNN IKFEQPARPE AHQQAKEFSQ
MFNIASRPII VAGSSHAPEE DVLLDAHKLI LQHIPDALLI IVPRHPQRFD DVYQICKLSG
LCSLRSSDER PCDTDTQVLL VDEMGKLQAL YALATIAFVG GSIADRGGHN ALEPAAFEVP
ILMGVHRYNN PAICQVLSDN GALFEANTPE QISQKVMLWL RNETLRKHAG KAGKQVLQEN
SGAVSATLQA LGFAMSNH
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