Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Patl_0048 |
Symbol | |
ID | 4172893 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudoalteromonas atlantica T6c |
Kingdom | Bacteria |
Replicon accession | NC_008228 |
Strand | + |
Start bp | 59813 |
End bp | 60049 |
Gene Length | 237 bp |
Protein Length | 78 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 638053046 |
Product | ribosomal protein L28 |
Protein accession | YP_659634 |
Protein GI | 109896379 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0227] Ribosomal protein L28 |
TIGRFAM ID | [TIGR00009] ribosomal protein L28 |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.635259 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCAAAG TATGTATAGT GACAGGCAAG CGTCCAGCGG TAGGTAACAA CCGTTCACAC GCTAAAAACT CGACTCGTCG TCGTTTTTTG CCAAATCTAC AAACCCACCG TTTTTGGGTT GAAAGCGAAA ACCGTTTCGT TAAATTGCGT TTATCTGCTA AAGGTATGCG TATTATTGAT AAGAAAGGTA TTGATTCAGT ATTAACTGAT ATCCGTGCCA ATGGCGTAAA AATTTAA
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Protein sequence | MSKVCIVTGK RPAVGNNRSH AKNSTRRRFL PNLQTHRFWV ESENRFVKLR LSAKGMRIID KKGIDSVLTD IRANGVKI
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