Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Patl_0044 |
Symbol | slmA |
ID | 4172889 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudoalteromonas atlantica T6c |
Kingdom | Bacteria |
Replicon accession | NC_008228 |
Strand | - |
Start bp | 56015 |
End bp | 56608 |
Gene Length | 594 bp |
Protein Length | 197 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 638053042 |
Product | nucleoid occlusion protein |
Protein accession | YP_659630 |
Protein GI | 109896375 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00442405 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAATAG CAAAAAAGAT AAATCGCCGT GCGCAAATAT TACAAGCACT TGCCAGTATG CTGCAAACCA ACCCAGGCCA GCGGATCACT ACCGCTAAAT TAGCGGCTCA TGTTGGTGTG TCAGAAGCCG CGCTGTACCG TCACTTTCCC AGCAAAGCCC GCATGTTTGA GGGCTTAATA GAGTTTATTG AAGAGACTCT TTTTTCGCGT ATTAATAAAA TTATTAATGA AGAAAAAGAT TCCACGACTC GCTGCCAACT TATTCTGCGC CTTATACTTG GCTTTGCGGA GAAAAACCCG GGGATCACAC GCATCTTAAA CGGTGACGCT TTAATGGGCG AGCAAGATCG ATTGCGTGAC CGAATAGCCC AATTATTTGA ACGTTTAGAA ACCCAGTTAA AACAAGTTCT CAGAGAAAGA AAATTACGCG AAGGTAAATC ACTTCCCGCT GAAGAGGCCA TAATCGCGAA TTTCCTTATT TGCTATGTAG ATGGGCGAAT TAATCTGTTT ATTCGCAGTA AATTTACCCG CCGCCCAACA GAGGGTTTCA ACGACCAATG GCAGTTAATT AGCACTCAGT TCTTTTTGAA CTAG
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Protein sequence | MAIAKKINRR AQILQALASM LQTNPGQRIT TAKLAAHVGV SEAALYRHFP SKARMFEGLI EFIEETLFSR INKIINEEKD STTRCQLILR LILGFAEKNP GITRILNGDA LMGEQDRLRD RIAQLFERLE TQLKQVLRER KLREGKSLPA EEAIIANFLI CYVDGRINLF IRSKFTRRPT EGFNDQWQLI STQFFLN
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