Gene Patl_0041 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_0041 
Symbol 
ID4172886 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand
Start bp51625 
End bp51948 
Gene Length324 bp 
Protein Length107 aa 
Translation table11 
GC content42% 
IMG OID638053039 
Producthypothetical protein 
Protein accessionYP_659627 
Protein GI109896372 
COG category[S] Function unknown 
COG ID[COG4517] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGAAAA ATACTTCACT CTTTAGAATT CAATTTATCG CCAATGGCGT ACGCTACGAA 
CTATATGTGC GCGAATTGTG TCAGGGCAGC TTATTTGGTT TTATCGAAAT TGGCGATTTT
GTGTGGGACA ACCACACCAG CGTGGTAGTT GACCCAAGCC ATGAAAAACT CAAAGATGAG
TTCGCTGATG TCACCACCAC GTACATACCA ATGCACAATG TTTTACGCAT CGATGAGGTA
AAAAAACAAG GTACGGCTAA AATCAGCGAG CTATCTGATA AGGTAACGGC TTTCCCAAGC
CCAATTTATA CTCCGAAAAA GTAA
 
Protein sequence
MSKNTSLFRI QFIANGVRYE LYVRELCQGS LFGFIEIGDF VWDNHTSVVV DPSHEKLKDE 
FADVTTTYIP MHNVLRIDEV KKQGTAKISE LSDKVTAFPS PIYTPKK