Gene Patl_0036 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_0036 
Symbol 
ID4172881 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand- 
Start bp46615 
End bp47304 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content46% 
IMG OID638053034 
Producthypothetical protein 
Protein accessionYP_659622 
Protein GI109896367 
COG category[S] Function unknown 
COG ID[COG4544] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACTCAA CAATCAATCA GCTCAAAAAC AAGCGTCTAG TTTGGCGAGC CAGCCAAGCA 
AGTGGTGCTC ATAAGGTTTT GCCCAGCGGT TTTGATGCTC TCGATGCTCA CCTAGAAGGT 
GGTTTGCCTG AGCAAGGTGT AGTTGATATT AGTAGCCCAA CTGGCATTGG TGAATTGCGC 
TTACTCTTGC CTAGCTTCGT ATTGCGCCAA CAAAACAGCG ACAAACTTTT AGTCTTTATT 
GGTGCACCCG CTCGGTTGAA TGCACCCATG CTGGCGAAAA TGGGCTTTGA GTTATCGCGT 
ATTCTGATTA TTGAACCCAA GAATGCAAAG GATGCTTTAT GGTCAACTGA GCAATGCTTA 
AAAAGTGGCT GCTGTGATGG AGTATTGTTG TGGCATCATG GCCTAGAAGT ACACCAAGCA 
AAGCGACTAC AATTCGCGGC AGAGGCAGGC GGGGCATTAA ATATTGTGCT ACGCCAGCAA 
CAAAAACAGG TATTTTCATT GCCGGTGGCT TTAGCAATGC AGTTATCCTC ATCTTCTCAG 
GGTATCGAGG TAACCATTTT AAAACGCAAA GGCGGTTGTC ATAGCCAGCC CTTCACCGTC 
AATATGAGCA AGATGTGGCC ATCATTAACG CGACCTATAC CAGCAAATAA TGTTCTTCCT 
CTCACTGGCT TACATAGCCT TACCGGCTAA
 
Protein sequence
MNSTINQLKN KRLVWRASQA SGAHKVLPSG FDALDAHLEG GLPEQGVVDI SSPTGIGELR 
LLLPSFVLRQ QNSDKLLVFI GAPARLNAPM LAKMGFELSR ILIIEPKNAK DALWSTEQCL 
KSGCCDGVLL WHHGLEVHQA KRLQFAAEAG GALNIVLRQQ QKQVFSLPVA LAMQLSSSSQ 
GIEVTILKRK GGCHSQPFTV NMSKMWPSLT RPIPANNVLP LTGLHSLTG