| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_0034 |
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| Symbol | |
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| ID | 4172879 |
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| Type | |
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| Is gene spliced | No |
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| Is pseudo gene | Yes |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 42057 |
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| End bp | 45148 |
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| Gene Length | 3092 bp |
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| Protein Length | |
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| Translation table | |
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| GC content | 42% |
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| IMG OID | 639330397 |
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| Product | |
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| Protein accession | |
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| Protein GI | |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0587] DNA polymerase III, alpha subunit |
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| TIGRFAM ID | [TIGR00594] DNA-directed DNA polymerase III (polc) |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.940199 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCATTCA GAAAGGATCA ATATGCTGAG TTATTTTGTC AGAGTAATTT CAGTTTTTTA
CAAGCCGCAT CGCATCCAAG TGAACTCATT AACCAAGCAG AATTTCTAGG TTACCAAGCA
CTTGCTATCA CTGATGAATG TAGTGTAGCA GGGATAGTAC GCGCTCACTC CGAAATAAAA
AAAAAGGCTT ATCCATTAAG TTAATTGTCG GTAGCATGTT CTACTACAAT GCTGAACTTC
AACTTATTCT ATTATGCCCT AACCATAATG CATACGCCGA GCTGTGCCGC ATTATTACCA
ATGCGCGACG CCGTGCAGAT AAGGGGGAGT ATAAGCTCGA TTTATGGGAT CTTAGAACGA
CCAAGCATTG CTTGGCTATT TGGATCCCAA GTGGCAACCC CGAGCAAAAT GAGTATTGGG
CAACATGGCT AACCAATCAT TATGACGCTC GTTTATGGAT AGGATATCAA CGACATTTAC
TTGCTGAAGA GCATATTCAT CAAGCACATT GCGAGCATTT AAGCAGTCGC TTTAATATCC
CTATTACCGC TTGCGGTGGG GTATTAATGC ACGAAATTGA ACGATATGAC TTACTCTGCG
TTATAAATTC AATACGAAAA GTAAAAAATA TTGAACATTC AGTGCAAGAC ATCCCACAAA
ACGCTGAACG CTCCTTGAGA CCAGTCCAAA ATCTATCTCG CTTATATCCT GCTCTATGGT
TGGCCGAAAG TGTCAGTATT GCGAATTTAT GTACTTTCGA TTTGAGCGAA TTAAGTTATC
AATACCCTGC GGAACTCGTT CCTGAGGGTT CAACACCGAC ACTTTATTTA CGTAAGTTGG
TTAAGCAAGG TATGTCTTTA CGATTCCCTG AAGGAGTAAA TTTCGCAATA AAACGCATCA
TTGCAAAAGA GTTAAAGCTG ATCGAGGAAC TTAAATACGA GTTCTTTTTT TTAACTATTT
CAGACATCGT GCAATATGCA AAATCCCAGC ATATTTTATA TCAAGGTCGA GGCTCTGCAG
CGAATTCTGT GGTCTGCTAT TGCTTAGAAA TTACCGCTGT TGATCCAAGA CAAATATCAG
TTTTATTCGA GCGATTTATC TCAAAAGAGC GCAACGAACC ACCAGATATT GATGTTGATT
TTGAGCACGA AAGACGTGAA GAGATCATTC AGTATATTTA TAAAAAATAT GGTCGCGAAC
GAACAGCTAT CGCAGCAACC GTGATCTCAT ATCGGCAAAA AAGTGCGATT CGAGACGTGG
GAAAAGCGCT GGGTATTCAC GAATCACAGT TGGATTTTTT TATTAAAAAT ATTAACCGAC
GTGACAAAGG GCTTAACTGG CAAGCACAAA TATCAGAACT GGGTTTGGAC CCGAGCTCAG
GCAAAGGTAA ACACTTCATT AAGCTCGTTA ATGAGATAAA AGGCTTCCCT CGTCACTTGT
CTCAACATGT AGGCGGGTTC GTCATATCAG CTACCCCTTT ATATCAACTT GTTCCTATTG
AAAATGCCTC GATGCCCGAT CGTAGTGTTA TTCAGTGGGA CAAAGACGAT TTAGAGAACT
TAGGGCTACT CAAGGTCGAT GTACTCGCTC TCGGCATGTT GACTGCTATT CGCAAGAGTT
TTGATTTAAT TGAGAAACAT CAGGGTAAAA CCATTTCAAT TGCCGATATC ACCCGACTGC
CTAGCGACCC TGATGTTTAC GCTATGATAC AGCGCGCCGA TACAGTAGGT GTATTTCAGA
TAGAGTCCCG AGCCCAGATG ACCATGCTAC CTCGTCTACG CCCTAAGTGT TTCTATGATC
TTGTGATTCA GATTGCCATT GTTAGACCTG GGCCTATTCA GGGCGATATG GTCCATCCCT
TCCTTAGACG GCGCGACGGT CTTGAACCCG TTGATTATCC GTCTAAAGAA GTAGAGTCTG
TACTGTCACG CACTATGGGC GTTCCTATCT TCCAAGAACA GGTCATTAAG ATAGCGATGG
TCGCTGCTGG CTTTAGTGGA GGCGAGGCAG ACCAGCTTCG TAGAGCAATG GCCAGTTGGA
AGAAAACCGG TGAATTAATT AAGTTTAAGC ACAAGCTGAT TAAAGGCATG CTTGCTAGAG
GTTATAAAAG TCAATTTGCC GAACAGTTAT ATAAACAGAT TTGCGGCTTT GGTGAATATG
GTTTCCCCGA ATCACATTCA GCCTCTTTTT CCGTATTGGC TTATGTGTCT TCTTGGTTGA
AATACTATTA TCCAGAAAGC TTTTATTGTG GCCTACTCAA TAGTTGGCCC ATGGGTTTCT
ATACCCCAGA TCAACTTATA CAAGACGCTA AGCGCCATCG TATTAAAGTG CTACCTGTAT
GCATTAATGC ATCTGACTAT GACCACATCC TAGAGCAGAC TAAAGGAAAC CTTGCCCTAC
GTTTAGGTTA TCGACTAATT AAAGGCTTAT CCAGAAAGGA AATGGAAAGC TTTGTGAATT
TGCGTCCAAA TAAAGGCTTT AGTGCATTAG CTCAACTTAA AGAATCAGGC TTAACTAAAA
CATCCTTAGA AACATTGGCT AGTGCCAATG CATTTAGCAG TATTAGCGAT AACCGCTACA
CAGCCAAATG GTTACTTATG GATTCAGAAA GTGAATTACC GCTGTTTAAA CAACTGACTA
TGGATAATGC ATTTAACCCT GAGCGGCCTA GTGACCTTAA CGCCCTGTTA GAAGATTACC
GAACTACAGG GCTAAGCTTA GACTCTCACC CAGTACGTTT ACTCAATCAC GCCCGATTAT
TGGGCCATTA TACGCCGGCG GCTCAACTAG ACACCATCGC ACATAAATCT GTGGTCAAGG
TCGTTGGCTT AGTAAAAGGA AGGCAAAGCC CAGGCACAGC ATCGGGTGTT ACCTTCATCA
CTCTTGAAGA TGATACAGGC AATAGCAACG TGATCGTATG GCAGGCAACC GCCCGCGCCC
AAAAGCAAGC CTACTTAAAA GCTCAAATAC TCAAAGTCAT CGGTATATTA GAAAGAGGAG
ATGGCGGCGT AACTCATATC ATCGCCGGAA GACTAGAAGA CCTAAGCCAT TTAGTAGACG
AACTAGCCAT CCACTCAAGA GATTTTCATT AG
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| Protein sequence | |
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