| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_0033 |
|---|
| Symbol | |
|---|
| ID | 4173578 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudoalteromonas atlantica T6c |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008228 |
|---|
| Strand | - |
|---|
| Start bp | 35035 |
|---|
| End bp | 35568 |
|---|
| Gene Length | 534 bp |
|---|
| Protein Length | 177 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 638053027 |
|---|
| Product | carbonic anhydrase/acetyltransferase |
|---|
| Protein accession | YP_659620 |
|---|
| Protein GI | 109896365 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0663] Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.000120925 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTATTA GAATGTATAA GGGCATAAAG CCAACTCTGG CAGAGAGTTG TTATATAGAT
GAATCAAGTG TGGTGGTGGG TGATATCGAA TGCGGCGATG ACGTGAGTAT TTGGCCATTG
GTTGCAGCAC GTGGTGATGT TAACTACATA AAGATAGGTG CTAGAAGTAA TATTCAAGAT
GGTTCAGTGC TGCACGTGAG CCGAGTGACT AAAGAAAACC CTAAAGGCCA TCCGCTTATT
ATTGGGGAGG ATGTCACTGT CGGTCATAAA TGTATGTTGC ATGGCTGCGT GTTAGGTAAC
CGTATTCTCG TTGGTATGGG GGCGATCGTA ATGGATGGTG CTATCGTTGA AGACGACGTA
TTTATTGGAG CAGGCAGTTT AGTTCCACCA AATAAGCGTT TAGAGAGCGG TTATCTTTAT
GTAGGTAGCC CAATTAAGCA AGCTAGGCCA CTGAAAGATT CTGAACGTGC TTTTTTGAAA
GTATCGGCTG ATAACTACGT CAGACTTAAA AATGAGTATC TAGAAGAAGT ATAG
|
|---|
| Protein sequence | MSIRMYKGIK PTLAESCYID ESSVVVGDIE CGDDVSIWPL VAARGDVNYI KIGARSNIQD
GSVLHVSRVT KENPKGHPLI IGEDVTVGHK CMLHGCVLGN RILVGMGAIV MDGAIVEDDV
FIGAGSLVPP NKRLESGYLY VGSPIKQARP LKDSERAFLK VSADNYVRLK NEYLEEV
|
|---|
| |