| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_0029 |
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| Symbol | |
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| ID | 4173574 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 31975 |
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| End bp | 32898 |
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| Gene Length | 924 bp |
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| Protein Length | 307 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638053023 |
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| Product | coproporphyrinogen III oxidase |
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| Protein accession | YP_659616 |
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| Protein GI | 109896361 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0408] Coproporphyrinogen III oxidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCCAAC CACACGTGAC CGATATCGAA TCGGTAAAGC AGTTTTTGCT TGATCTGCAA
GACAATATTT GCCAAACGCT AGAAATGGCT GACGGTAAGG GTAGTTTCAT CGAAGACAAC
TGGCAGAGAG AATTAGGTGG GGGCGGGCGT ACGCGCGTGC TGACGAATGG CCAGGTGATT
GAGCAGGGCG GAGTTAACTT TTCTCATGTA TACGGTGGGC AACTTCCGGC ATCTGCAACG
GCGTCTCGAC CAGAGCTAGC AGGTCGGAGC TTTCAAGCGA TGGGCGTTTC ACTCGTTATT
CATCCTAAAA ATCCTCACGT ACCGACCTCC CATGCGAATG TGCGCATATT CATTGCTGAA
AAAGAAGGTG AAGAGCCTAT CTGGTGGTTT GGCGGTGGTT TCGACTTAAC ACCTTTCTAC
CCGGTGCATG AAGATGTACT CCATTGGCAT CAAACTGCCA AGGATTTATG TGAGCCCTTT
GGTAAAGACG TATACAGCAA ATATAAAAAA TGGTGTGACG ACTACTTTTA CTTAAAACAT
CGCGATGAAA CGCGGGGAGT AGGGGGGCTT TTCTTTGATG ATTTAAATGA ATGGGGCTTT
GAACGTAGTT TTGCATTCAT GCAAGCTGTC GGTAATGGTT TTTTAGATGC CTATGTACCT
ATTTTAGAAA AACGTAAAGA TACGTCTTTT TCAGAGCAGG AAAGAAGCTT CCAGCTATAT
AGAAGAGGCC GGTATGTAGA GTTTAATTTG GTTTGGGACA GAGGAACCTT ATTCGGCTTG
CAAACGGGAG GGCGAACAGA GTCAATATTG ATGTCTATGC CGCCTCTTGC TCGTTGGGAG
TACGACTTCC ACCCAATACC AGGCAGTAAA GAAGATGCTT TGTATGCAGA TTATCTGCAT
CCTCGGGACT GGTTAAACGA GTAG
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| Protein sequence | MPQPHVTDIE SVKQFLLDLQ DNICQTLEMA DGKGSFIEDN WQRELGGGGR TRVLTNGQVI
EQGGVNFSHV YGGQLPASAT ASRPELAGRS FQAMGVSLVI HPKNPHVPTS HANVRIFIAE
KEGEEPIWWF GGGFDLTPFY PVHEDVLHWH QTAKDLCEPF GKDVYSKYKK WCDDYFYLKH
RDETRGVGGL FFDDLNEWGF ERSFAFMQAV GNGFLDAYVP ILEKRKDTSF SEQERSFQLY
RRGRYVEFNL VWDRGTLFGL QTGGRTESIL MSMPPLARWE YDFHPIPGSK EDALYADYLH
PRDWLNE
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