Gene Patl_0026 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_0026 
Symbol 
ID4173571 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand
Start bp30246 
End bp30722 
Gene Length477 bp 
Protein Length158 aa 
Translation table11 
GC content40% 
IMG OID638053020 
Producthypothetical protein 
Protein accessionYP_659613 
Protein GI109896358 
COG category[S] Function unknown 
COG ID[COG2922] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTGATA TCCTCATGTA TCTTTTTGAA AATTTCATTC ACAGCGAAAC AGAAATTCGC 
GTCGATCAAG ATGAATTGAC CGACGAACTG GTGCGCGCCG GTTTTCATCA AGATGAAATA
TACAAAGCAT TATCTTGGCT CGAAAAACTA GCGGCTTTAC AAGAAACTGA CATAAACCCT
TATTTAGTGA AAGGGCCTAC TTCTTTTGTT ACACGTATTT ATACGCATGA AGAAGAGATG
CGCCTCGATA TCGAGTGCCG TGGCTTTCTC ATGTTTTTAG AGCAAATTAA TGTACTGGAC
TCTACAACGC GTGAGATGGT TATTGATCGC GTCATGGAAA TCGACTCTAA AGAATTCTGT
TTAGAGGACA TGAAGTGGGT TGTGCTTATG GTGCTGTTCA ACGTGCCGGG TAAAGAAAAT
GCTTATGCAC AAATGGAAGA TTTATTATTT GAAGAGCCAG AAGGGCCGTT GCATTAA
 
Protein sequence
MFDILMYLFE NFIHSETEIR VDQDELTDEL VRAGFHQDEI YKALSWLEKL AALQETDINP 
YLVKGPTSFV TRIYTHEEEM RLDIECRGFL MFLEQINVLD STTREMVIDR VMEIDSKEFC
LEDMKWVVLM VLFNVPGKEN AYAQMEDLLF EEPEGPLH