Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Patl_0014 |
Symbol | engB |
ID | 4171839 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudoalteromonas atlantica T6c |
Kingdom | Bacteria |
Replicon accession | NC_008228 |
Strand | + |
Start bp | 15261 |
End bp | 15881 |
Gene Length | 621 bp |
Protein Length | 206 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 638053008 |
Product | ribosome biogenesis GTP-binding protein YsxC |
Protein accession | YP_659601 |
Protein GI | 109896346 |
COG category | [R] General function prediction only |
COG ID | [COG0218] Predicted GTPase |
TIGRFAM ID | [TIGR03598] ribosome biogenesis GTP-binding protein YsxC/EngB |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.877601 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAGTCATT ATAGTCAAGC CAAGTTTAAT TTAAGCGCGC CAGATATTAG CCACCTAAGT GCAGACCAAG GGATTGAAGT CGCTTTTGCT GGACGTTCAA ATGCGGGTAA GTCTAGTGCG CTTAATCGTT TGACACGGCA AAAGAGCTTA GCCCGCACCA GTAAAACGCC GGGACGCACG CAATTAATTA ACGTTTTCGA TTTAGACGAA GATCGACGCT TAATTGATTT GCCGGGTTAC GGTTATGCAA AAGTACCAAT GGCCATCAAA CTGAAGTGGC AGAAATCTTT AGGGGAATAC CTACAAAAAC GCGAAAGCCT AAAAGGACTT GTTGTATTAA TGGACATTCG TCACCCTTTC AAAGATTTAG ACCAAGAGTT GATTCAATGG GCTGTCGCAG CAGATTTGCC AGTGTTAGGT TTACTCACTA AAGCGGATAA ACTCAAATCA GGTAAGCGTA AAGCACAGCT GCTGATGGCG AGAGAAGCCT CTCTTGCTTT TTGTGGTGAT GTGACGATCC ATCTGTTTTC GTCATTAAAC GGATTAGGCT TAGATAACTG TGAACGAGTG CTAGATAAGT GGTTTGGATA TGCTCAAGAT GAAGAGCTAG AGCAAGAATA A
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Protein sequence | MSHYSQAKFN LSAPDISHLS ADQGIEVAFA GRSNAGKSSA LNRLTRQKSL ARTSKTPGRT QLINVFDLDE DRRLIDLPGY GYAKVPMAIK LKWQKSLGEY LQKRESLKGL VVLMDIRHPF KDLDQELIQW AVAADLPVLG LLTKADKLKS GKRKAQLLMA REASLAFCGD VTIHLFSSLN GLGLDNCERV LDKWFGYAQD EELEQE
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