Gene Patl_0011 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_0011 
Symbol 
ID4171836 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand
Start bp12966 
End bp13415 
Gene Length450 bp 
Protein Length149 aa 
Translation table11 
GC content41% 
IMG OID638053005 
Producthypothetical protein 
Protein accessionYP_659598 
Protein GI109896343 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTTCTA TCACTATTTT ACTGATCCTT GTTGCCTTCG TTATTATTGC GTCATTAGCA 
TTCTATGCTG GCAAGTTATT GTTTATGCTC AACAAGCAAA ACAAAAAAAT GGCTCGAACG
AAACAACAAC GAATAGAGCG GCTTATGGAA AGTATCCATA CCATTTCCAT GGCTGTTGAG
CAGCAACAAT GCAATCTATC AGAGGGAAGC ATTCGCTTAT ATCATTTGCA TGAGAGCTTA
CCCATTGACG ATAAACCAGA TTACGAGACC CGCTACCCTG GTTTGTACGC GCTATATGTG
AAAGTGAGTG ACTTAGCTAC GCATGAAGCA AGAGATAAGC TTTCTGCGCT TGAGCGTAAA
ACTCAGGATA TTGCTCGCGA AGCATTAGAA AGGGAATTAG AAAGCCAGAT CTTGGAAGAC
GTAGCCAAGT TAAGAGCGTT TACACCTTAA
 
Protein sequence
MSSITILLIL VAFVIIASLA FYAGKLLFML NKQNKKMART KQQRIERLME SIHTISMAVE 
QQQCNLSEGS IRLYHLHESL PIDDKPDYET RYPGLYALYV KVSDLATHEA RDKLSALERK
TQDIAREALE RELESQILED VAKLRAFTP