Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Patl_0011 |
Symbol | |
ID | 4171836 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudoalteromonas atlantica T6c |
Kingdom | Bacteria |
Replicon accession | NC_008228 |
Strand | - |
Start bp | 12966 |
End bp | 13415 |
Gene Length | 450 bp |
Protein Length | 149 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 638053005 |
Product | hypothetical protein |
Protein accession | YP_659598 |
Protein GI | 109896343 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTTCTA TCACTATTTT ACTGATCCTT GTTGCCTTCG TTATTATTGC GTCATTAGCA TTCTATGCTG GCAAGTTATT GTTTATGCTC AACAAGCAAA ACAAAAAAAT GGCTCGAACG AAACAACAAC GAATAGAGCG GCTTATGGAA AGTATCCATA CCATTTCCAT GGCTGTTGAG CAGCAACAAT GCAATCTATC AGAGGGAAGC ATTCGCTTAT ATCATTTGCA TGAGAGCTTA CCCATTGACG ATAAACCAGA TTACGAGACC CGCTACCCTG GTTTGTACGC GCTATATGTG AAAGTGAGTG ACTTAGCTAC GCATGAAGCA AGAGATAAGC TTTCTGCGCT TGAGCGTAAA ACTCAGGATA TTGCTCGCGA AGCATTAGAA AGGGAATTAG AAAGCCAGAT CTTGGAAGAC GTAGCCAAGT TAAGAGCGTT TACACCTTAA
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Protein sequence | MSSITILLIL VAFVIIASLA FYAGKLLFML NKQNKKMART KQQRIERLME SIHTISMAVE QQQCNLSEGS IRLYHLHESL PIDDKPDYET RYPGLYALYV KVSDLATHEA RDKLSALERK TQDIAREALE RELESQILED VAKLRAFTP
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