Gene Patl_0010 details

Gene Information

• Locus tag: Patl_0010
• ID: 4171835
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudoalteromonas atlantica T6c
• Kingdom: Bacteria
• Replicon accession: NC_008228
• Strand: +
• Start bp: 12372
• End bp: 12944
• Gene Length: 573 bp
• Protein Length: 190 aa
• Translation table: 11
• GC content: 40%
• IMG OID: 638053004
• Product: DNA-3-methyladenine glycosylase I
• Protein accession: YP_659597
• Protein GI: 109896342
• COG category: [L] Replication, recombination and repair
• COG ID: [COG2818] 3-methyladenine DNA glycosylase
• TIGRFAM ID: [TIGR00624] DNA-3-methyladenine glycosylase I

Plasmid Coverage information

• Num covering plasmid clones: 17
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCAACATA TACGCTGTGC ATGGGTTTCA CAGGATCCCA TATATCAAGA ATATCACGAC 
AAAGTTTGGG GTCGCCCAGT AAGAAACAAA TATGAGCTTT TCGCTAAATT ATGCCTAGAT 
GGCCAACAAG CTGGTTTGAG CTGGATAACT ATTCTAAAAA AACAGCAAAA CTATTATCAA 
GCCTTTCATC AATTTGACCC GCAACGCATC AGTGAAATGA CAGAAGATGA TGTTGAACGC 
TTAATGCAAG ATAAAGGGAT CGTTAGAAAC AGACTTAAGA TAAATTCAAT TATTAAGAAT 
GCTAAGGGGT TTCTCGAAAT AGAACGTGAA GGCACTGACT TTTCAGAATT CATTTGGTCT 
TTTGTCGCAA ACGAACCGAT CATAAACGCT TGGGCTGAGA AAAGTCAGGT ACCTAATACC 
TCTAGCGAAT CTGATGCGAT GGCCAAGGCC TTGAAAAAGC GCGGCTTTTC ATTCGTGGGA 
AGCACTATTT GTTACGCCTT TATGCAAGCC GTTGGGTTGG TTAATGACCA CACCCAAGAC 
TGCTTTTGTT ACCCAGTTAA TGAAAAGAGA TAA 

 

Protein sequence

MQHIRCAWVS QDPIYQEYHD KVWGRPVRNK YELFAKLCLD GQQAGLSWIT ILKKQQNYYQ 
AFHQFDPQRI SEMTEDDVER LMQDKGIVRN RLKINSIIKN AKGFLEIERE GTDFSEFIWS 
FVANEPIINA WAEKSQVPNT SSESDAMAKA LKKRGFSFVG STICYAFMQA VGLVNDHTQD 
CFCYPVNEKR