| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_0009 |
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| Symbol | glyQ |
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| ID | 4171834 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 11351 |
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| End bp | 12256 |
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| Gene Length | 906 bp |
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| Protein Length | 301 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638053003 |
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| Product | glycyl-tRNA synthetase subunit alpha |
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| Protein accession | YP_659596 |
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| Protein GI | 109896341 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0752] Glycyl-tRNA synthetase, alpha subunit |
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| TIGRFAM ID | [TIGR00388] glycyl-tRNA synthetase, tetrameric type, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.424313 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAATAAGT TTGATAGTAA AACCTTCCAA GGACTGATCT TATCACTCCA AGACTACTGG
GCAAGACAAG GGTGCGTAAT CATTCAACCT CTCGATATGG AAGTTGGCGC AGGTACTTTC
CATCCCATGA CATTTTTACG CTCTATTGGT CCAGAACCGA TTAGCAGTGC TTATGTTCAA
CCATGTCGTC GACCCACAGA TGGCCGATAT GGTGAGAACC CAAACAGATT ACAGCATTAC
TACCAATTTC AGGTCATGTT GAAACCATCA CCCAGTAATA TTCAAGAACT CTATTTGGGC
TCATTAAAAG AGCTAGGCTT CGATCCCTTA GTGCATGATA TTCGCTTTGT GGAAGATAAC
TGGGAATCCC CCACCCTGGG TGCTTGGGGT TTAGGCTGGG AAGTTTGGCT AAATGGTATG
GAAGTCACTC AATTTACTTA TTTCCAACAG GTTGGAGGGA TTGAATGTTC ACCTGTCACC
GGCGAAATCA CCTACGGTTT AGAGCGTCTT GCTATGTACA TTCAAGGTGT AGACAGTATT
TATGATCTCG TTTGGACTGA CGGCCCTATG GGCAAAGTAA CTTATGGTGA CGTTTTCCAT
CAAAACGAAG TTGAACAGTC TACTTATAAT TTTGAGTATG CTGACGTAGA TGCGTTGTTC
GGTATGTTTG ATCACTGCGA AAAAGAAAGT CAGAAGATGA TTGAAGCTGG ATTACCTCTA
CCTGCATACG AGCAGGTGAT GAAAGCATCT CACGCGTTTA ACCTGTTAGA TGCCCGCCAC
GCCATCTCAG TAACAGAGCG TCAACGTTAC ATACTGCGTG TTCGTACGCT CTCAAAAGCC
TGTGCAGAGG CTTATTATCA AGCACGAGAA AAGCTTGGAT TTCCAATGTG TAAGAAGGAG
GCTTAA
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| Protein sequence | MNKFDSKTFQ GLILSLQDYW ARQGCVIIQP LDMEVGAGTF HPMTFLRSIG PEPISSAYVQ
PCRRPTDGRY GENPNRLQHY YQFQVMLKPS PSNIQELYLG SLKELGFDPL VHDIRFVEDN
WESPTLGAWG LGWEVWLNGM EVTQFTYFQQ VGGIECSPVT GEITYGLERL AMYIQGVDSI
YDLVWTDGPM GKVTYGDVFH QNEVEQSTYN FEYADVDALF GMFDHCEKES QKMIEAGLPL
PAYEQVMKAS HAFNLLDARH AISVTERQRY ILRVRTLSKA CAEAYYQARE KLGFPMCKKE
A
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