| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_0008 |
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| Symbol | glyS |
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| ID | 4171833 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 9269 |
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| End bp | 11347 |
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| Gene Length | 2079 bp |
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| Protein Length | 692 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638053002 |
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| Product | glycyl-tRNA synthetase subunit beta |
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| Protein accession | YP_659595 |
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| Protein GI | 109896340 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0751] Glycyl-tRNA synthetase, beta subunit |
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| TIGRFAM ID | [TIGR00211] glycyl-tRNA synthetase, tetrameric type, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGTTACG AAAATCTATT GGTTGAAATT GGTACCGAAG AATTACCACC TAAAGCACTG
GGTAAATTGG CTCAGGCCTT CGCTGATAAC TTGCAAGGCG CGCTGGACAC AGCTGAACTC
AAGTATACCT CGATTAAATG GTTTGCCTCC CCTCGCCGCT TAGCTGTCAA TGTCATTGGA
CTGGCTGAGC AACAAGAAGA CAAGTTGATC GAAAAGAAAG GTCCTGCCGT GTCGGTGGCA
TTCGATGAAT CAGGCCAGGC AACGAAAGCC GCTCAAGGTT GGGCTCGTTC TAATGGCATT
ACCGTCGAGC AAGCGGAACG GTTAACTACC GACAAAGGCG AGTGGCTTTT GTTCAAAGGC
GAAGCAAAAG GCGAGCAAGT CTCTTCGTTG TTGCCAGCCA TGATTGATGG AGCCCTTAAA
AAACTGCCAA TCCCTAAAGC GATGCGCTGG GGAAGCAGTT CCATTCAGTT TATTCGCCCT
GTTCATACCG TTACTATGCT CTTTGGGGCG GATGTTATTG AAGGCAATAT TTTAGGTATT
GATTCAGACC GTGTTATTAA TGGTCATCGC TTTCATGGCG AAAAGCAATT TAGTCTATCT
CACGCCGATG ACTACCTTGC ACAGCTTGAA GCGCACTACG TATTAGCCGA TTTTTCAGCT
CGTAAAGATA AAATACGTCA CCAAGTTAAT GCGGCAGCAC AAAAAGAAGA TGCTGTTGCT
GATATGAATG AAGACCTGCT GGACGAAGTT ACAGCGCTGG TTGAATGGCC CGTCGCATTG
ACCGCGAGTT TCGACGATTC CTTCTTAGAA GTTCCAAAAG AAGCCCTTAT CTATACGATG
AAGGATGATC AAAAGTACTT CCCGCTTATC GACCAAAACG GCCAGCTAAA GTCTCGATTC
GTGTTTGTGA CAAACATTGA AAGCAAAGAC CCAATGCAGA TTATTAGTGG CAACGAGAAA
GTGATTCGAC CTCGTTTGGC TGACGCGGAG TTCTTCTTTA ATACCGATAA AAAGACCACG
CTTGAATCAC GTCTAGAAAG CCTGAAGACA GTGTTGTTTC AGAAACAGTT AGGCACTTTA
TACGAAAAGT CACAACGCAT ATCCGAGCTC GCAGGCACCA TCGCGAATAT GCTTAGTAGT
GACATCTCTC AGGCCTCACG CGCCGGTTTA CTATCAAAAA CAGATCTTAT GACCAATATG
GTCATGGAGT TCCCTGATGT TCAGGGTGTA ATGGGTATGC ATTACGCTAA ACATGATGGC
GAACACGATA AAGTCGCATT GGCACTGAAT GAACAATACA TGCCTCGCTT CGCTGGTGAC
CAATTGCCCA CGTCGAACAT CAGTTGTGCA GTAGCAATAG CAGATAAAAT TGATACGCTG
GTAGGTATAT TTGGTATTGG CCAAGTCCCT AAAGGCGATA AAGACCCTTT CGCGCTCAGA
CGTGCGGCCA TTGGTGTTTT GCGAATTAGC GTAGAAATGA AACTACCACT GGACCTCACT
ACCTTAGTGC AAGCATCAAT AAACTCGTTC GGCACTAAGT TAACTCATGT TGAAGACTTA
GAGTCTCAAG TAATTGATTT TATCTTGGGG CGCTTCAGAG CTTGGTACCA AGATCAACAT
ATTGATATCG ATGTGATTCA AGCAGTAGCA GCTCGCCGCC CTACTAAACC TGCTGATTTC
GCGGCACGGA TAGAAGCAGT ATCTGCTTTT AAGAGTCTAG CCTCCGGGTT AGCACTTGCT
TCCGCGAATA AACGGGTAGC AAACATTCTC GCTAAGAATA AAGTGACTGA TACCAATAGT
ATCAATTCGA GTTTGTTTGA AAGTGAGCAT GAAGCAGCGT TAGCTGACGC AATGAGCGAC
ATAGAAGAAA CAGTCAATGC TTTCGTTGTG GATGCTAATT ACCAAGGGGT ATTTACAGAA
TTAGCCACAC TACACGACAA AGTGGATGCG TTTTTCGACA ATGTAATGGT CATGGCAGAA
GATGAGAACG TAAGAAACAA TCGCCTCGCC TTATTGTCAA AGTTGAGAAC GCTGTTCTTA
CTCGTTGCCG ATATTTCCAT TTTGAATCAA CAACAGTAA
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| Protein sequence | MRYENLLVEI GTEELPPKAL GKLAQAFADN LQGALDTAEL KYTSIKWFAS PRRLAVNVIG
LAEQQEDKLI EKKGPAVSVA FDESGQATKA AQGWARSNGI TVEQAERLTT DKGEWLLFKG
EAKGEQVSSL LPAMIDGALK KLPIPKAMRW GSSSIQFIRP VHTVTMLFGA DVIEGNILGI
DSDRVINGHR FHGEKQFSLS HADDYLAQLE AHYVLADFSA RKDKIRHQVN AAAQKEDAVA
DMNEDLLDEV TALVEWPVAL TASFDDSFLE VPKEALIYTM KDDQKYFPLI DQNGQLKSRF
VFVTNIESKD PMQIISGNEK VIRPRLADAE FFFNTDKKTT LESRLESLKT VLFQKQLGTL
YEKSQRISEL AGTIANMLSS DISQASRAGL LSKTDLMTNM VMEFPDVQGV MGMHYAKHDG
EHDKVALALN EQYMPRFAGD QLPTSNISCA VAIADKIDTL VGIFGIGQVP KGDKDPFALR
RAAIGVLRIS VEMKLPLDLT TLVQASINSF GTKLTHVEDL ESQVIDFILG RFRAWYQDQH
IDIDVIQAVA ARRPTKPADF AARIEAVSAF KSLASGLALA SANKRVANIL AKNKVTDTNS
INSSLFESEH EAALADAMSD IEETVNAFVV DANYQGVFTE LATLHDKVDA FFDNVMVMAE
DENVRNNRLA LLSKLRTLFL LVADISILNQ QQ
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