Gene Rxyl_3121 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRxyl_3121 
Symbol 
ID4114920 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRubrobacter xylanophilus DSM 9941 
KingdomBacteria 
Replicon accessionNC_008148 
Strand
Start bp3131436 
End bp3132317 
Gene Length882 bp 
Protein Length293 aa 
Translation table11 
GC content69% 
IMG OID638037888 
Productglucose-1-phosphate thymidylyltransferase 
Protein accessionYP_645840 
Protein GI108805903 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1209] dTDP-glucose pyrophosphorylase 
TIGRFAM ID[TIGR01207] glucose-1-phosphate thymidylyltransferase, short form 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGGGCA TCGTGCTCGC CGGCGGCTCC GGGACCCGGC TCTACCCGCT CACCATAGCG 
GTCAGCAAGC AGCTGCTGCC CGTCTACGAC AAGCCCATGA TCTACTACCC CCTCTCCACC
CTCATGATGG CCGGCATCCG GGAGATCCTC ATCATCTCCA CCCCCCAGGA CCTGCCGCGC
TTCGAGCAGC TGCTGGGCGA CGGCTCGCAG TGGGGGATGA GCTTCAGCTA CGCCGTCCAG
CCCCGCCCCG AGGGGCTCGC GCAGGCGTTC GTCATCGGGC GGGACTTCGT CGGGCGGGAG
AACGTCTCGC TCATCCTGGG CGACAACATC TTCTACGGCC AGGGCTTCGA GGAGCTGCTC
GGGCGGGCGG CGTCCCGCAG GGAGGGGGCG ACCATCTTCG GCTACTACGT CCGCGACCCC
GAGCGCTACG GGGTGGTCGA GTTCGACCGC GACGGGAGCG TCCTCTCCAT CGAGGAGAAG
CCCGAGCGGC CCCGCTCGCA CTACGCGGTG ACCGGCCTCT ACTTCTACGA CAACCGGGTG
CTGGACATCG CGGCGGGGCT CAAGCCCTCC TGGAGGGGGG AGCTGGAGAT CACCGACGTG
AACGTGGCCT ACCTGCGCCT CGGCGAGCTG CGGGTGGAGC TGATGGGCCG GGGGATGGCC
TGGCTCGACG CCGGGACCCA CGAGTCGCTG CAGCAGGCGG GCAACTTCAT AGAGACGCTG
GAGGTGCGGC AGGGGCTGAA GATCGGGTGC CCGGAGGAGA TCGCCTACCG CCGGGGCTAC
ATCGACGCGG CCCAGCTGGA GCGGCTGGCG GCCGCGATGC AGAAGAACGG CTACGGCCAG
TACCTGCTGG AGCTGCTGCG GAGCGAGGAG TTCGTGGTGT GA
 
Protein sequence
MKGIVLAGGS GTRLYPLTIA VSKQLLPVYD KPMIYYPLST LMMAGIREIL IISTPQDLPR 
FEQLLGDGSQ WGMSFSYAVQ PRPEGLAQAF VIGRDFVGRE NVSLILGDNI FYGQGFEELL
GRAASRREGA TIFGYYVRDP ERYGVVEFDR DGSVLSIEEK PERPRSHYAV TGLYFYDNRV
LDIAAGLKPS WRGELEITDV NVAYLRLGEL RVELMGRGMA WLDAGTHESL QQAGNFIETL
EVRQGLKIGC PEEIAYRRGY IDAAQLERLA AAMQKNGYGQ YLLELLRSEE FVV