Gene Rxyl_3046 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRxyl_3046 
Symbol 
ID4114846 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRubrobacter xylanophilus DSM 9941 
KingdomBacteria 
Replicon accessionNC_008148 
Strand
Start bp3054638 
End bp3055396 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content69% 
IMG OID638037814 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_645766 
Protein GI108805829 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGCGGCC TGGAAGGCAA GGTGGCGCTC ATAACCGGCG GCGCGACCGG CATAGGGCGA 
GCCACGGCCC TGCTCTTCGC CCGGGAGGGC GCCTGCGTGC TCATCGGCGA CATCAACGAG
GAGGGGGCCT CGGAGACGGT CGAGGCCGTG AGGGCAGCGG GGGGAGACGC GGCCTTCCGG
CGCTGCGACG TGAGCGGGGA GGAGGAGATA GCCGCCCTCG TCGCTGCCGC CGGTGAGGAG
TACGGCAGGC TCGACGTAGT CTTCGGGAAC GCCGGGCTGC TCCGTACGAG GCCGCTGGAG
GATCTCTCGA CGAAGGAGTT CGAGCTACAC CTGAGGATAA ACCTGACCGC CAACTTCCTG
CTCACCAAAT ATGCCGCCCC CGTGATGAGG CGGCATGAGG GTGGGTCCAT CATCTTTATG
GCCTCCGCTG GGGGCCTGCG AGGCACGCGC GGCTCCGTCG CCTACAACGC CTCCAAGGGG
GGGCTCGTCA ACATGACCCG CTCGCTGGCC GACGAGCTCG CGCCGCACAA CATCCGGGTC
AACTGCGTGT GTCCCGGGTG GGTGGACACC CCGTTCAACC GCCCGTTCTG GGAGCACGCG
GGGGCGGGCG CCGAGGAGGA GGTTCTGAGG GGCGTCCCGC TCCGCCGGCA GTGCACCCCG
GAGGAGGTCG CGCCCGCGGT CGTCTTCCTC GCGGGAGAAG GAGCGAGCTA CATCACGGGG
GAGGCGCTCG TTATAGACGG TGGGATGCTG GCGACCTGA
 
Protein sequence
MSGLEGKVAL ITGGATGIGR ATALLFAREG ACVLIGDINE EGASETVEAV RAAGGDAAFR 
RCDVSGEEEI AALVAAAGEE YGRLDVVFGN AGLLRTRPLE DLSTKEFELH LRINLTANFL
LTKYAAPVMR RHEGGSIIFM ASAGGLRGTR GSVAYNASKG GLVNMTRSLA DELAPHNIRV
NCVCPGWVDT PFNRPFWEHA GAGAEEEVLR GVPLRRQCTP EEVAPAVVFL AGEGASYITG
EALVIDGGML AT