Gene Rxyl_3036 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRxyl_3036 
Symbol 
ID4115971 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRubrobacter xylanophilus DSM 9941 
KingdomBacteria 
Replicon accessionNC_008148 
Strand
Start bp3043612 
End bp3044412 
Gene Length801 bp 
Protein Length266 aa 
Translation table11 
GC content51% 
IMG OID638037805 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_645757 
Protein GI108805820 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0600] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAGCCA TTGCCCGGCA CCAGCAAGTT AGGCCTCAAA AACGCAGATC ATCATCCTTT 
AAAACGTGGC TTTATGCAGT TCTCTCCGCC GGACTCGTCT TCGGAATGTG GCAGCTTGCC
ACAATATTAT TTGATATCCC AACATATATA CTCCCAACGC CTGTAGAAGT AACCTTCACA
GCTTTTGAGG AGCGACAGCG CATTTTGGAT GCGATTGGTG TGACCGGACT CGAGGCTGTT
GGTGGCTTCA TCGTCGGCAA CTTTACGGGT TTCCTGGCAG CAACGCTTAT AGCTTACTCT
ACTACCGCAG CACGCACCTT GCTACCTATT GGGCTCGCCA TTCAGTCGAT TCCAATAGTT
GCGCTAACGC CGTTTTTAAC GCTGTTGTTC GGGCGCGGCT TTGCAACTGT TATGATCATC
GCTGCCATAA TAGTTTTTTT CCCAACATTA GTGAACGGTG TGTTGGGTTT CAGGTCGGTG
AGAGCAGAGG CTCTCGAAAT GTTGGGCATA ATGAGCGCTT CAGACTGGCA AGTCTTCTGG
CACTTGCGAT TTCCCACTGC GCTCCCTAAC CTGTTCGCAG CATTCCGGAT TGGGGCTGCG
ACCAGCATCT TGGGAGCAAT GATCGCCGAG TGGGTGACGA CAGGCAGTGG TCTTGGCTAC
CTAATCCTAC AGGCGGGGGT TAATTTCGAG GTCGAGCTCA TGTGGGCCGC GATCTTGATC
TCCAGCATGC TGGCGCTTAC TGCACTCGCC TTGATATCGC TTGTCGAAAA TCTGCTTTGT
CCCTGGATTG TTGAGACATG A
 
Protein sequence
MEAIARHQQV RPQKRRSSSF KTWLYAVLSA GLVFGMWQLA TILFDIPTYI LPTPVEVTFT 
AFEERQRILD AIGVTGLEAV GGFIVGNFTG FLAATLIAYS TTAARTLLPI GLAIQSIPIV
ALTPFLTLLF GRGFATVMII AAIIVFFPTL VNGVLGFRSV RAEALEMLGI MSASDWQVFW
HLRFPTALPN LFAAFRIGAA TSILGAMIAE WVTTGSGLGY LILQAGVNFE VELMWAAILI
SSMLALTALA LISLVENLLC PWIVET