| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_3007 |
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| Symbol | |
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| ID | 4115806 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rubrobacter xylanophilus DSM 9941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008148 |
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| Strand | - |
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| Start bp | 3015297 |
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| End bp | 3016055 |
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| Gene Length | 759 bp |
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| Protein Length | 252 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 638037777 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_645729 |
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| Protein GI | 108805792 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.22334 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCCTGATC TTTCGGGGAA GGTTGCCTGG GTTACGGGGA GCAGCACGGG CATCGGGGCG
GCCTGCGCCC TCGCGCTCGC CAGGGAGGGC TGCCGGGTCG CGGTCCACTA CAACCGCAGC
GGGGAGGAGG CCCGGCGGGT GGTGCAGAAG ATAGAAGGCT CCGGCGGTGA GGCGCTGCTG
GTCAGGGGCG ACGTCTCGGA CGCCGCCGAG GTGGGGCGGA TGGCCGCCGA GGTGGAGGAC
CGCTTCGGGG GGCTGGACTT TCTGGTGAAC AACGCCGGGG GCCTCCTGGA GCGGCGGCCC
TTCTCGGAGA TGACGGAAGA GCTCTGGGAG AGGGTGATGG AGGTGAACCT CAAGAGCGTC
TTTCTGGTCT CCCGCGCGGC GCTGCCGCTG ATGCGCCGGA GGGGAGGGGG GAGGATCGTG
AACGTCACCT CCATCGCCGC CCGGACCGGC GGCGGGCCTG GCTCTTCGGC CTACGCCTCG
GCCAAGGGCG GCGTGAGCAC CCTCACGCGG GCGATGGCCA AGGAGCTCGT CTCGGAGAAC
ATCCTGGTAA ACGGGGTTGC GCCGGGGGTC ATCGCCACCC CGTTCCACGA CCGCTACACC
CCGCCGGAGG TGCGCGAGCG GCTCCGCCGC GGGATCCCCA TCGGGCGGGA GGGGACGCCG
GAGGAGGTGG CCGGGGTGGT GGTCTTTTTG CTCTCCCCGG CCGCGGACTA CCTGGTGGGC
GAGATCGTGG AGGTCAACGG CGGCCAGCTC ATGGACTGA
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| Protein sequence | MPDLSGKVAW VTGSSTGIGA ACALALAREG CRVAVHYNRS GEEARRVVQK IEGSGGEALL
VRGDVSDAAE VGRMAAEVED RFGGLDFLVN NAGGLLERRP FSEMTEELWE RVMEVNLKSV
FLVSRAALPL MRRRGGGRIV NVTSIAARTG GGPGSSAYAS AKGGVSTLTR AMAKELVSEN
ILVNGVAPGV IATPFHDRYT PPEVRERLRR GIPIGREGTP EEVAGVVVFL LSPAADYLVG
EIVEVNGGQL MD
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