| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_3003 |
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| Symbol | |
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| ID | 4115802 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rubrobacter xylanophilus DSM 9941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008148 |
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| Strand | - |
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| Start bp | 3010744 |
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| End bp | 3012231 |
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| Gene Length | 1488 bp |
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| Protein Length | 495 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 638037773 |
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| Product | ABC transporter related |
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| Protein accession | YP_645725 |
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| Protein GI | 108805788 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1129] ABC-type sugar transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00261146 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGAGCCGG TGGTTCGGCT GCGGGGAGTA TCCAAGGAGT TCCCCGGGGT TGTGGCGGTG
GATGGTGTGG ATCTGGACAT CCTCCCGGGG GAGGTGCACG TGGTTGCGGG GGAGAACGGG
GCTGGCAAGA GCACCCTCAT GAAGCTCCTC TCGCAGGTGG AGCGGCCGAC GTCCGGCGAG
ATCTACATCT CCGGCGAGCG GGTTGAGTTC CACGGGCCGG GGCATGCCCG GCGGCTGGGG
GTGGCGATGG TCTACCAGGA GTTTGCGCTG GCCCCCCACC TCTCGGTGGC GGAGAACCTC
TTTCTCGGGC GGGAGCCGGG GAGGGGCGGC TTCGTCAACC GGCGGGCGGA GAAGGAGGAG
GCGCGGGGGC TCTTGAGGCG GGTGGGGCTC GAGGTGGACC CCGACCGGCT CGTCTCCAGC
CTCACGGTCG CCGAGCAGCA GCGGGTGGAG ATCGCCAAGG CCCTCGCCAT AGACGCCAGG
GTCGTCATCA TGGACGAGCC CACCGCCACG CTCGCCGAGA AGGAGATAGA GGAGCTCTTC
GAGGTCATAA GGGACCTCAC CTCTCACGGG CGGGCCGTGC TCTACATCTC GCACCGGCTG
GACGAGATCT TCCGGATCGC CGACCGGGTG ACCGTCATGC GCGACGGGAA GGTCGTGGCC
ACCCTCCCCG TGGAGGAGCT GGACGAGGCG AAGCTCGTGC GGCTCATGGT GGGGCGGGAG
ATCGGCAACC TCTACCCCAA GCCCGAGGCG GAGATCGGGG AGGTGCTGCT GCGGGTGCGC
GGGCTCAGCC GCGGGGAGAG GCTGAAGGAC TGCTCCTTCG AGGTGAGGGC GGGGGAGATC
CTCGGCTTCG CCGGGCTCGT GGGGGCCGGG AGGACCGAGC TCGCGCGGGC GGTCTTCGGC
GCCGACCCCG TGGACTCCGG GGAGATCGAG CTGGAGGGCA GACCGCTGCG CATCCGCAAG
CCGCAGGACG CCATAGAGGC CGGCATCGGC TACCTCACCG AGGACCGCAA GGGGGAGGGG
CTCGCGCTGC AGCTCGGGAT CGACCAGAAC ATCACGCTCG CCAGCCTGCC CGCCCGGCTC
GGGTTCATCG GCCTCGGCCG GGAGCGCAGC ATCGCCGAGC GGCGCAGGGA GCAGCTCAAC
ATCCGCACCC CCTCCGTCCG GCGCAAGGTG CAGGTGCTCT CCGGGGGCAA CCAGCAGAAG
GTCGTGGTGG CCCGCTGGCT CGAGACCCGG GCCAGGGTGC TCTTCTTCGA CGAGCCCGCG
CGCGGCATAG ACGTGGGGGC CAAGGCCGAG ATGTTCGCCC TCATCGGGGA GCTGGCCAGG
GAGGGGCGGG GGATAGTGCT CATCTCCTCC TACCTGCCGG AGCTCATAAA CATGTGCGAC
CGGATACTCG TGATGCGCGA CGGGCGCGTG GCGGGCGTCC TGGAGAGGGA GGAGTTCTCG
GAGGAGGGGA TCATAGCCTT GGCGACCGGA GTGAAGGAGA CCGTATGA
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| Protein sequence | MEPVVRLRGV SKEFPGVVAV DGVDLDILPG EVHVVAGENG AGKSTLMKLL SQVERPTSGE
IYISGERVEF HGPGHARRLG VAMVYQEFAL APHLSVAENL FLGREPGRGG FVNRRAEKEE
ARGLLRRVGL EVDPDRLVSS LTVAEQQRVE IAKALAIDAR VVIMDEPTAT LAEKEIEELF
EVIRDLTSHG RAVLYISHRL DEIFRIADRV TVMRDGKVVA TLPVEELDEA KLVRLMVGRE
IGNLYPKPEA EIGEVLLRVR GLSRGERLKD CSFEVRAGEI LGFAGLVGAG RTELARAVFG
ADPVDSGEIE LEGRPLRIRK PQDAIEAGIG YLTEDRKGEG LALQLGIDQN ITLASLPARL
GFIGLGRERS IAERRREQLN IRTPSVRRKV QVLSGGNQQK VVVARWLETR ARVLFFDEPA
RGIDVGAKAE MFALIGELAR EGRGIVLISS YLPELINMCD RILVMRDGRV AGVLEREEFS
EEGIIALATG VKETV
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