Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rxyl_2937 |
Symbol | |
ID | 4115893 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rubrobacter xylanophilus DSM 9941 |
Kingdom | Bacteria |
Replicon accession | NC_008148 |
Strand | - |
Start bp | 2945552 |
End bp | 2946139 |
Gene Length | 588 bp |
Protein Length | 195 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 638037707 |
Product | peptidase C60, sortase A and B |
Protein accession | YP_645659 |
Protein GI | 108805722 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3764] Sortase (surface protein transpeptidase) |
TIGRFAM ID | [TIGR01076] LPXTG-site transpeptidase (sortase) family protein |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGGCGGT ACGGGCGCTG GAGGCTGGGA CGGGTGGCCG CTGCGGCTGC GGCGTTGGGG CTGCTCGCTG GGGCGGGGCT CTTGGGCTAC TCGGTCTACG GGGGTGGTTC GGCGGTGGCC GGGGTTGCCG AGGCGGACGG CGGTTCGGTG GAGGCGCCGC GGGGGGGCGA GCTGTGGCTC ACGGTGCCGC GGATGGAGCG GGTGAGGGAG GTGCCGGTGC GGGACGCGCC GGCCGACGCC GAGGAGGTTC TGGACAGGGG GCTTCTGCAC GTGCGGGGCA CCGGCTTTCC GTGGCAGGAG GAGGCCAACG TGTACATCGC CGGGCACCGG CTCGGGTACG CGGGGACGGG GAGCTACCTG CAGTTCTACG ATCTGCCCGG GCTCAGGAAG GGCGACGAGA TCATCCTGCG GGACGCCGCC GGGAACACCT ACACCTACCG GGTGTTCAGG AAGTTCGTGG TGCCGCCCGA CGCCGTGCGG GTGATGGAGC CGCTGCCCGG CAGGAACATC GTCTCGCTGC AGACCTGCAC GCTGCCGGAC TACTCGCACC GGCTGGTGGT GCAGGGCGAG CTGGTGGAGG CGGGCTGA
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Protein sequence | MRRYGRWRLG RVAAAAAALG LLAGAGLLGY SVYGGGSAVA GVAEADGGSV EAPRGGELWL TVPRMERVRE VPVRDAPADA EEVLDRGLLH VRGTGFPWQE EANVYIAGHR LGYAGTGSYL QFYDLPGLRK GDEIILRDAA GNTYTYRVFR KFVVPPDAVR VMEPLPGRNI VSLQTCTLPD YSHRLVVQGE LVEAG
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