Gene Rxyl_2919 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRxyl_2919 
Symbol 
ID4117398 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRubrobacter xylanophilus DSM 9941 
KingdomBacteria 
Replicon accessionNC_008148 
Strand
Start bp2924403 
End bp2926148 
Gene Length1746 bp 
Protein Length581 aa 
Translation table11 
GC content74% 
IMG OID638037689 
Productputative PAS/PAC sensor protein 
Protein accessionYP_645641 
Protein GI108805704 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG2208] Serine phosphatase RsbU, regulator of sigma subunit 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACGCGA CCCACCCCGG CTGGCTGGAG GGAGACCCCT GGGAGCGGCA GGGCGCGGAG 
GGCACGCGCC GGCTGCTGGA GCGGGCTGTG GCCGCCAGCT CGGGCGGCAT AGTCATCACC
GACCCCAACC TCCCCGACAA CCCCATCATC TACGTCAACC CGGCCTTCGA GCGGATAACC
GGCTACTCGA GGCGGGAGGT GGTGGGCCGC AACTGCCGCT TTCTGCAGCG GGAGGACCGG
GGGCAGGCGG AGCTGGAGGT TCTCCGCCAG GCGATGGCCG AGCGGAGGGA CTGCCGGGTG
GTGCTGCGCA ACTACCGGCG CGACGGGAGG ATGTTCTGGA ACGAGCTGTA CGTCTCCCCC
GTCTACGACG AGGACGGCCG CCTGGTGAAC TTTATCGGGG TGCAGAACGA CATCACCGAG
CGCAAGCGGA TGGAGGAGGA GCGCAACCTG CTGCTCGCCC GCGAGCAGCT CGCCCGCGCG
GAGGCGGTGA AGGCCCAGCG CCGCCTGAGC TTTCTGGCCG GGGCCGACGC CCTGCTGCTC
TCCACGGTGG ACTACCCGGG GCGCCTCCGG CAGACCGCCA GGATAGCCGT CCCGGAGCTG
GCGGACTGGT GCGTGGTGGA CGTGCTGAAC GAGGACGGCT CGGTGCGCCA GATCGCGGCG
GCCCACGCCG AGCCCTCCCG CGAGGAGCTG CTCGAGGAGC TGGGCCGTAT CCGCGAGCGC
CACGGGCGGC CGCCCGGTCT GGTGGCCCGG GTGCTCAAGG AGGGGCGCCC GGTGCTCGTC
GAGCGGGTCG GGGAGGGCGC GCTCGAGGAG AACGCCCTCG GGCCGGACCA TCTGGAGGTG
CTACGTAGGC TCGAGGTCCG CTCCCTGATC GTCGTGCCGC TGCTCGCCCG CGGCAGGACG
ATAGGGGCGA TGAGCCTCGT CTCCTCCCGC GAGGACCGCT CCTACGGGGA GGAGGAGCTC
TCGCTGGCCC GCAGCCTGGC CTACCGCTGC GCGCTCGCCG TGGACAACGC CCGGCTCTAC
CACGAGCGGG GCCGGATAGC CAGCATATTG CAGCAGAGCC TCCTACCCCG CCTGCCGGAG
CCCGAGGGGC TCGACGTCGG GGTCGAGTAC CTGCCGGTCG GCCGGGAGAA CGAGGCCGGC
GGGGACTTCT ACGACCTGAT CGAGACCGGC CGCGGGTGGC TGGCTGTGAT CGGCGACGTG
CGGGGCAAGG GGGCGGCGGC GGCCGCGATC ACCGCCCTCG CCCGTTACAC GATCCGGGCG
GTTGCCATGC GCGAGGGCTC CCCCTCCAGG GTCCTCTCGG ACCTGAACGA GGCGATGCTG
CGCCAGCTGG AGGGGCACCG CTTCTGCACG GTGGCGTGCG CGGGGCTGAG CCGGAACGGG
GCCGGGCTGG AGCTGAGCGT GGCGCGGGCG GGGCACCCCG CGCCGCTGCT GCTGCGCCGC
GACGGGCGGG TGGAGACGCT GGAGGTGCCC GGCCGGGCGC TCGGGGTCTT CGCGGACCCC
CGGCTGGCGG AGCGCCCGGC GCACCTGGAG CCCGGGGACG CCGCCGTCTT CTACACCGAC
GGGGTCACCG AGGTTCGCAG CCCGGGGGGC AGCCTCTTCG GGGAGGAGAG GCTGCGCCGG
CTGCTCGGCT CCTGCGCGGG CCTCGGGGCC GGCCGGATCG CCGCGCGCGT CAGGGAGGAG
GCTCTGAAGC ACGGCGGGGG AGGGCTGCGG GACGACCTGG CCGTGCTCGT GGTCAGGGCC
GCCTGA
 
Protein sequence
MNATHPGWLE GDPWERQGAE GTRRLLERAV AASSGGIVIT DPNLPDNPII YVNPAFERIT 
GYSRREVVGR NCRFLQREDR GQAELEVLRQ AMAERRDCRV VLRNYRRDGR MFWNELYVSP
VYDEDGRLVN FIGVQNDITE RKRMEEERNL LLAREQLARA EAVKAQRRLS FLAGADALLL
STVDYPGRLR QTARIAVPEL ADWCVVDVLN EDGSVRQIAA AHAEPSREEL LEELGRIRER
HGRPPGLVAR VLKEGRPVLV ERVGEGALEE NALGPDHLEV LRRLEVRSLI VVPLLARGRT
IGAMSLVSSR EDRSYGEEEL SLARSLAYRC ALAVDNARLY HERGRIASIL QQSLLPRLPE
PEGLDVGVEY LPVGRENEAG GDFYDLIETG RGWLAVIGDV RGKGAAAAAI TALARYTIRA
VAMREGSPSR VLSDLNEAML RQLEGHRFCT VACAGLSRNG AGLELSVARA GHPAPLLLRR
DGRVETLEVP GRALGVFADP RLAERPAHLE PGDAAVFYTD GVTEVRSPGG SLFGEERLRR
LLGSCAGLGA GRIAARVREE ALKHGGGGLR DDLAVLVVRA A