Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rxyl_2874 |
Symbol | |
ID | 4115870 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rubrobacter xylanophilus DSM 9941 |
Kingdom | Bacteria |
Replicon accession | NC_008148 |
Strand | - |
Start bp | 2876359 |
End bp | 2878602 |
Gene Length | 2244 bp |
Protein Length | 747 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 638037645 |
Product | ribonucleotide-diphosphate reductase subunit alpha |
Protein accession | YP_645597 |
Protein GI | 108805660 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0209] Ribonucleotide reductase, alpha subunit |
TIGRFAM ID | [TIGR02504] ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAGCCC GCAGGGAGAA CAGGGAGCTG ACCGACATAG AGCTCACCGA GAACGCGCTG GCGGTCCTCA GGAAGCGCTA CCTCAAGAAG AACGACCGCG GCGAGCCGGT GGAGCGGCCC GTGGACATGT TCCGCCGGGT GGCCGGCAAC ATCGCCGAGG CCGAGCTCAA GTTCAGGGAC GGCGAGGAGG GGCGCGCGCT GTACGAGGAG TACTACGGGC GTTTCCTGCA GATGATGCTC AGCCGGCGCT TCATGCCCAA CTCGCCCACC CTCATGAACG CGGGGAGGGA GCTGCAGCAG CTCTCGGCGT GCTTCGTGTT GCCGGTCGAG GACTCCATAG ACGGCATCTA CGACACCCTC AAGCACCAGG CCATCATCCA CAAGAGCGGC GGCGGGACGG GCTTCGCCTT CTCGCGCCTC AGGCCCAAGA ACGACATCGT CCAGAGCACG ATGGGGGTCT CTTCGGGGCC GGTGTCGTTC ATGGCCATCT ACGACGCCTC CACCGACAAG ATCAAGCAGG GTGGCACCCG GCGGGGGGCC AACATGGGCA TCCTGCGGGT GGACCACCCG GACATCGAGG AGTTCGTAAC CTGCAAGAAC GACAACGACC AGATCACGAA CTTCAACATC TCCGTGGCCA TCACCGACGC CTTCATGGAG GCGGTGGAGA AGGACGGCGA GTTCGAGCTG GTGAACCCGC GCAACGGCGC GGTGACCAGG CGGGTGAGGG CGCGGGAGCT CTTCAAGAAG ATAGCCTACG GGGCGTGGCT CAACGGCGAG CCGGGGGTGG TGTTCATAGA CAGGATCAAC GCCGACAACC CCACCCCGCA GTTCCCCATA GAATCCACCA ACCCCTGCTC CGAGGCGCAC CTGCCGCCGT ATGACTCGTG CAACCTCGGC TCGATCAACC TGTCCCTCTT CTACAGCGAG GAGGCGGGGG ACGTCGACTG GGAGGAGCTG CGCGAGACGG TCCGCACCGC GGTACGGTTC CTGGACAACG TCATCGAGCA GAACAACTAC CCGCTTCCCC AGATAGAGGA GATGAGCAAG GGGAACCGGA GGATCGGGCT CGGCGTCATG GGGTTTGCGG ACCTCCTCAT CAAGATGGGC ATCCCCTACG ACTCGGAGGA GGGGCTCGCC TTCGCCGAGC GGGTGATGCG GTTTATCGAC GAGGAGGCCT GGGAGGCCAG CCGGGCGCTC GCCGCCGAGA GGGGCGTCTT CGCCCACTAC GAGGGCTCGC GCCACGAGGC CCGCGGCGAC AGGGTGCGCA ACGCTACCGT CACCACCATA GCCCCCACGG GGACCATCTC CCTCATAGCC GGCTGCTCCG GGGGCATAGA GCCGCTGTAC GCGGTGGCCT TCATGCGCCG GCAGGCCGAC ATGGAGATGC CGGACGTGAA CCCCGAGTTC GTCCGGGTGG CCCGGGAGCG GGGCTTCTAC AGCGAGGAGC TGATGAAGAA GGTGGCCGAG CAGGGCAGCG TGCGCGGCCT CGAGGAGGTG CCCGAGGACG TGCGGCGGGT GTGGGTCACC TCCCACGACA TCAGCCCGGA GTGGCACGTC AGGATGCAGG CCGCCTTCCA GAAGCACACC TCGATGGGCA TCAGCAAGAC CATAAACCTG CCGAACGAGG CCACGGTGGA GGACGTGGAG AGGGCCTACC GGCTGGCGTA CTCTCTGGGG TGCAAGGGGA TCGCCGTCTA CCGCGACGGC TCCCGGGAGG AGCAGGTCCT CAGCACGGGC AAGACCGCGA AGCAGCCCGA GCCGCAGCCC AGGCACGTCT CTCTGGCCGA GGCGCGCAAC GGCCGGCCGC GCACCCTCAG CGGGGTGACA AAGAAGATCC GGACCGGCCA CGGGCCGCTC TACGTCACGA TGAACGACGA CGAGTTCGGG CCCCGGGAGT GCTTTATAGT GCTGGGCAAG CCGGGCGGGA CGGCCTCGGC CTTCTCGGAC GCTCTGGGGC GTATGATCTC GCTCGCCCTC AAGCACGGGG CGACGCCGGC GGAGATCTCG CACCAGCTCA AGGGCATCCA GGACGGGCAC CCCGCGGGCG TGGGGCCGAA CGCGGTGCTC TCGGTGCCCG ACGGCGTGGC CAAGGCGATG GCCGAGCACT ACCTGGTCGA GGAGGAGGAC GCCGAGGCTC GCGAGCTTCC CATCATCGGG GCGTGCCCGG ACTGCGGCAG CGGCCTGACC CGCCAGGAGG GCTGCGTGGT CTGCCACTCC TGCGGCTACT CGAAGTGCGG CTGA
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Protein sequence | MEARRENREL TDIELTENAL AVLRKRYLKK NDRGEPVERP VDMFRRVAGN IAEAELKFRD GEEGRALYEE YYGRFLQMML SRRFMPNSPT LMNAGRELQQ LSACFVLPVE DSIDGIYDTL KHQAIIHKSG GGTGFAFSRL RPKNDIVQST MGVSSGPVSF MAIYDASTDK IKQGGTRRGA NMGILRVDHP DIEEFVTCKN DNDQITNFNI SVAITDAFME AVEKDGEFEL VNPRNGAVTR RVRARELFKK IAYGAWLNGE PGVVFIDRIN ADNPTPQFPI ESTNPCSEAH LPPYDSCNLG SINLSLFYSE EAGDVDWEEL RETVRTAVRF LDNVIEQNNY PLPQIEEMSK GNRRIGLGVM GFADLLIKMG IPYDSEEGLA FAERVMRFID EEAWEASRAL AAERGVFAHY EGSRHEARGD RVRNATVTTI APTGTISLIA GCSGGIEPLY AVAFMRRQAD MEMPDVNPEF VRVARERGFY SEELMKKVAE QGSVRGLEEV PEDVRRVWVT SHDISPEWHV RMQAAFQKHT SMGISKTINL PNEATVEDVE RAYRLAYSLG CKGIAVYRDG SREEQVLSTG KTAKQPEPQP RHVSLAEARN GRPRTLSGVT KKIRTGHGPL YVTMNDDEFG PRECFIVLGK PGGTASAFSD ALGRMISLAL KHGATPAEIS HQLKGIQDGH PAGVGPNAVL SVPDGVAKAM AEHYLVEEED AEARELPIIG ACPDCGSGLT RQEGCVVCHS CGYSKCG
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