Gene Rxyl_2874 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRxyl_2874 
Symbol 
ID4115870 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRubrobacter xylanophilus DSM 9941 
KingdomBacteria 
Replicon accessionNC_008148 
Strand
Start bp2876359 
End bp2878602 
Gene Length2244 bp 
Protein Length747 aa 
Translation table11 
GC content67% 
IMG OID638037645 
Productribonucleotide-diphosphate reductase subunit alpha 
Protein accessionYP_645597 
Protein GI108805660 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0209] Ribonucleotide reductase, alpha subunit 
TIGRFAM ID[TIGR02504] ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAGCCC GCAGGGAGAA CAGGGAGCTG ACCGACATAG AGCTCACCGA GAACGCGCTG 
GCGGTCCTCA GGAAGCGCTA CCTCAAGAAG AACGACCGCG GCGAGCCGGT GGAGCGGCCC
GTGGACATGT TCCGCCGGGT GGCCGGCAAC ATCGCCGAGG CCGAGCTCAA GTTCAGGGAC
GGCGAGGAGG GGCGCGCGCT GTACGAGGAG TACTACGGGC GTTTCCTGCA GATGATGCTC
AGCCGGCGCT TCATGCCCAA CTCGCCCACC CTCATGAACG CGGGGAGGGA GCTGCAGCAG
CTCTCGGCGT GCTTCGTGTT GCCGGTCGAG GACTCCATAG ACGGCATCTA CGACACCCTC
AAGCACCAGG CCATCATCCA CAAGAGCGGC GGCGGGACGG GCTTCGCCTT CTCGCGCCTC
AGGCCCAAGA ACGACATCGT CCAGAGCACG ATGGGGGTCT CTTCGGGGCC GGTGTCGTTC
ATGGCCATCT ACGACGCCTC CACCGACAAG ATCAAGCAGG GTGGCACCCG GCGGGGGGCC
AACATGGGCA TCCTGCGGGT GGACCACCCG GACATCGAGG AGTTCGTAAC CTGCAAGAAC
GACAACGACC AGATCACGAA CTTCAACATC TCCGTGGCCA TCACCGACGC CTTCATGGAG
GCGGTGGAGA AGGACGGCGA GTTCGAGCTG GTGAACCCGC GCAACGGCGC GGTGACCAGG
CGGGTGAGGG CGCGGGAGCT CTTCAAGAAG ATAGCCTACG GGGCGTGGCT CAACGGCGAG
CCGGGGGTGG TGTTCATAGA CAGGATCAAC GCCGACAACC CCACCCCGCA GTTCCCCATA
GAATCCACCA ACCCCTGCTC CGAGGCGCAC CTGCCGCCGT ATGACTCGTG CAACCTCGGC
TCGATCAACC TGTCCCTCTT CTACAGCGAG GAGGCGGGGG ACGTCGACTG GGAGGAGCTG
CGCGAGACGG TCCGCACCGC GGTACGGTTC CTGGACAACG TCATCGAGCA GAACAACTAC
CCGCTTCCCC AGATAGAGGA GATGAGCAAG GGGAACCGGA GGATCGGGCT CGGCGTCATG
GGGTTTGCGG ACCTCCTCAT CAAGATGGGC ATCCCCTACG ACTCGGAGGA GGGGCTCGCC
TTCGCCGAGC GGGTGATGCG GTTTATCGAC GAGGAGGCCT GGGAGGCCAG CCGGGCGCTC
GCCGCCGAGA GGGGCGTCTT CGCCCACTAC GAGGGCTCGC GCCACGAGGC CCGCGGCGAC
AGGGTGCGCA ACGCTACCGT CACCACCATA GCCCCCACGG GGACCATCTC CCTCATAGCC
GGCTGCTCCG GGGGCATAGA GCCGCTGTAC GCGGTGGCCT TCATGCGCCG GCAGGCCGAC
ATGGAGATGC CGGACGTGAA CCCCGAGTTC GTCCGGGTGG CCCGGGAGCG GGGCTTCTAC
AGCGAGGAGC TGATGAAGAA GGTGGCCGAG CAGGGCAGCG TGCGCGGCCT CGAGGAGGTG
CCCGAGGACG TGCGGCGGGT GTGGGTCACC TCCCACGACA TCAGCCCGGA GTGGCACGTC
AGGATGCAGG CCGCCTTCCA GAAGCACACC TCGATGGGCA TCAGCAAGAC CATAAACCTG
CCGAACGAGG CCACGGTGGA GGACGTGGAG AGGGCCTACC GGCTGGCGTA CTCTCTGGGG
TGCAAGGGGA TCGCCGTCTA CCGCGACGGC TCCCGGGAGG AGCAGGTCCT CAGCACGGGC
AAGACCGCGA AGCAGCCCGA GCCGCAGCCC AGGCACGTCT CTCTGGCCGA GGCGCGCAAC
GGCCGGCCGC GCACCCTCAG CGGGGTGACA AAGAAGATCC GGACCGGCCA CGGGCCGCTC
TACGTCACGA TGAACGACGA CGAGTTCGGG CCCCGGGAGT GCTTTATAGT GCTGGGCAAG
CCGGGCGGGA CGGCCTCGGC CTTCTCGGAC GCTCTGGGGC GTATGATCTC GCTCGCCCTC
AAGCACGGGG CGACGCCGGC GGAGATCTCG CACCAGCTCA AGGGCATCCA GGACGGGCAC
CCCGCGGGCG TGGGGCCGAA CGCGGTGCTC TCGGTGCCCG ACGGCGTGGC CAAGGCGATG
GCCGAGCACT ACCTGGTCGA GGAGGAGGAC GCCGAGGCTC GCGAGCTTCC CATCATCGGG
GCGTGCCCGG ACTGCGGCAG CGGCCTGACC CGCCAGGAGG GCTGCGTGGT CTGCCACTCC
TGCGGCTACT CGAAGTGCGG CTGA
 
Protein sequence
MEARRENREL TDIELTENAL AVLRKRYLKK NDRGEPVERP VDMFRRVAGN IAEAELKFRD 
GEEGRALYEE YYGRFLQMML SRRFMPNSPT LMNAGRELQQ LSACFVLPVE DSIDGIYDTL
KHQAIIHKSG GGTGFAFSRL RPKNDIVQST MGVSSGPVSF MAIYDASTDK IKQGGTRRGA
NMGILRVDHP DIEEFVTCKN DNDQITNFNI SVAITDAFME AVEKDGEFEL VNPRNGAVTR
RVRARELFKK IAYGAWLNGE PGVVFIDRIN ADNPTPQFPI ESTNPCSEAH LPPYDSCNLG
SINLSLFYSE EAGDVDWEEL RETVRTAVRF LDNVIEQNNY PLPQIEEMSK GNRRIGLGVM
GFADLLIKMG IPYDSEEGLA FAERVMRFID EEAWEASRAL AAERGVFAHY EGSRHEARGD
RVRNATVTTI APTGTISLIA GCSGGIEPLY AVAFMRRQAD MEMPDVNPEF VRVARERGFY
SEELMKKVAE QGSVRGLEEV PEDVRRVWVT SHDISPEWHV RMQAAFQKHT SMGISKTINL
PNEATVEDVE RAYRLAYSLG CKGIAVYRDG SREEQVLSTG KTAKQPEPQP RHVSLAEARN
GRPRTLSGVT KKIRTGHGPL YVTMNDDEFG PRECFIVLGK PGGTASAFSD ALGRMISLAL
KHGATPAEIS HQLKGIQDGH PAGVGPNAVL SVPDGVAKAM AEHYLVEEED AEARELPIIG
ACPDCGSGLT RQEGCVVCHS CGYSKCG