| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_2794 |
|---|
| Symbol | |
|---|
| ID | 4117626 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rubrobacter xylanophilus DSM 9941 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008148 |
|---|
| Strand | - |
|---|
| Start bp | 2803986 |
|---|
| End bp | 2804531 |
|---|
| Gene Length | 546 bp |
|---|
| Protein Length | 181 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 638037565 |
|---|
| Product | NUDIX hydrolase |
|---|
| Protein accession | YP_645519 |
|---|
| Protein GI | 108805582 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG1051] ADP-ribose pyrophosphatase |
|---|
| TIGRFAM ID | [TIGR00052] nudix-type nucleoside diphosphatase, YffH/AdpP family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCGGGTA GAGGGTGGCG CACGCTCGGG CGGGACTACC TGCACCGCAG CCCGTGGTTC
ACCTTCCGGC TGGACAGGGT GGAGCTTCCG GACGGGCGGG TGATCGAGTA CGGCATCATG
GAGAGCGGCG GCTTCGCCTC GGTGGTGCCG CTCACGGGGG AGGGGGAGGT GGTGCTCGTG
CGGCAGTGGC GGCAGCCGCT CGGGGGCTTC ACGCTGGAGC TGCCGAGCGG GGCCGTCGAC
GCCGGGGAGG AGCCGCGCGC GGCCGCCGGG CGGGAGCTCT TCGAGGAGAC CGGCTACCGG
GCCGAGGGCC TAAAGCACCT CATCTCCGTC CACACCAGCA CCGGGCGCAG CACCGAGGTG
TGCCACCTCT TCGCCTGCCG GGCGGTGCGC GACGGCCGGG GGCCGCGCCC CGAGCCGACG
GAGTTCATAG AGGTGGTGCG GGTGCCGCTG CGGGAGGCGC TGGGGATGGT CTTCTCGGGC
GGCATCACCG ACGCGGCCTC GGTGCTCGGC CTTCTTTGGG TTGCGGGGCG CCTCGGGCCG
GGGTAA
|
|---|
| Protein sequence | MAGRGWRTLG RDYLHRSPWF TFRLDRVELP DGRVIEYGIM ESGGFASVVP LTGEGEVVLV
RQWRQPLGGF TLELPSGAVD AGEEPRAAAG RELFEETGYR AEGLKHLISV HTSTGRSTEV
CHLFACRAVR DGRGPRPEPT EFIEVVRVPL REALGMVFSG GITDAASVLG LLWVAGRLGP
G
|
|---|
| |