Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rxyl_2755 |
Symbol | |
ID | 4115273 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rubrobacter xylanophilus DSM 9941 |
Kingdom | Bacteria |
Replicon accession | NC_008148 |
Strand | + |
Start bp | 2767077 |
End bp | 2767976 |
Gene Length | 900 bp |
Protein Length | 299 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 638037528 |
Product | farnesyl-diphosphate synthase |
Protein accession | YP_645482 |
Protein GI | 108805545 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0142] Geranylgeranyl pyrophosphate synthase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAGGTCGG CGAGCCCGGC CGGGGTCGAG GGCTTTCTGG CCCTGCGCGA GGTCATCGAG GAGTACCTGG AGGGGCTGCG CTTCACCGAA GAGCCCGCCC TCGAGCGGCT GCAGGAGGCG ATGCGCTACT CGCTGCTTGC CGGGGGAAAG CGCGTGAGGC CCCTCCTCTG CATGGAGAGC GCCAGCCTCT TCGGCGCTCC CCCGGAGAGG GTGCTCCCCT CCGCCGCCGC CATAGAGCTG ATCCATACGT TCTCCCTCAT CCACGACGAC CTTCCCGCGA TGGACAACGA CGACTTCCGC AGGGGCAAGC CCACCAGCCA CAAGAAGTTC GGGGAGGCGA TGGCCATCCT GGCGGGCGAC GCCTTCTTCG GGGAGTCCCT CGCCCTCATC ACCGACCACC AGGAGGGGAG CGCCGAGCAG GTGCTCGCGG TCGTCCGGGA GCTCGCCCAC GCCACCGGGC TCGCCGGGCT AGCGGGCGGC CAGGCGCTAG ACCTGGAGCA CACCGGCCGC CGGGCGGGCC CAAAGGAGCT GGAGCTCACC CACCACCACA AGACCGGGGC CCTCATCCGG GCCTCCGCCC GGATAGGCGC CATCCTGGCC GGGGCGGGCG AGGAGGGGCT CGAGGCCATC TCGCGGTACG CCACGGAGCT TGGGCTGTGC TTCCAGATAG TGGACGACGT GCTGGACGCG GTGGGCAGCA GCGAGCGGCT GGGCAAGCGG GCCGGGGGGG ACGCCGAGCG GGGCAAGGCC ACGTTTGTGA GCGTGTTTGG GCTCGAGGGG GCCAGGAGGG AGGCCGACGC CGCCTGCGAG CGGGCGCTGC GGGCGCTCGG GCGCCTGGAA GGCCGGGACA CCTCGAGGCT CGAGGCCCTG GCCCTCTTCG TACGCGACAG GGACCGCTGA
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Protein sequence | MRSASPAGVE GFLALREVIE EYLEGLRFTE EPALERLQEA MRYSLLAGGK RVRPLLCMES ASLFGAPPER VLPSAAAIEL IHTFSLIHDD LPAMDNDDFR RGKPTSHKKF GEAMAILAGD AFFGESLALI TDHQEGSAEQ VLAVVRELAH ATGLAGLAGG QALDLEHTGR RAGPKELELT HHHKTGALIR ASARIGAILA GAGEEGLEAI SRYATELGLC FQIVDDVLDA VGSSERLGKR AGGDAERGKA TFVSVFGLEG ARREADAACE RALRALGRLE GRDTSRLEAL ALFVRDRDR
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