| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_2557 |
|---|
| Symbol | |
|---|
| ID | 4115388 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rubrobacter xylanophilus DSM 9941 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008148 |
|---|
| Strand | + |
|---|
| Start bp | 2579308 |
|---|
| End bp | 2580483 |
|---|
| Gene Length | 1176 bp |
|---|
| Protein Length | 391 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 638037328 |
|---|
| Product | citrate synthase |
|---|
| Protein accession | YP_645286 |
|---|
| Protein GI | 108805349 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0372] Citrate synthase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGGAG CGGCGCATGC AAGGTCGGAG CGAGAGCCGG GGGTCGAGGT GAGCGGGGGT
GCCGCGTTCG CGCCGGGCCT CGAGGGCGTG GTGGCGACGA GGACGCGCCT CAGCATGGTG
GATGGGGCGG CGGGCAGGCT GGTCATCGCG GGCTTTCCGG TCGAGGAGCT GGCGGGTCGG
GCGTCCTTCG AGGAGACGCT CTACCTGCTC TGGAACGGCG TGCTGCCCGA CGCCGGGCGG
CTGGAGGGAC TGAGGGGGGA TCTCGCCGCC CGCCGGGCGT TGCCGGAGGC GGCCGGTGAG
GTGCTGGAGG CCGCGGTCGC CGGGGGGGCC GCGCCGATAG ACGCCCTGCG CATGGCCGCG
GGGACGCTCG CGCCGAGCGG CAACGACCGC GACGACGCCC TGACGTCGGT CGCCGCCTTC
CCCACCATCG TCGCCGCCTG CTGGCGTCTT TCGCAAGGGC GGGAGCCGGT CGAGCCCGAC
CCCGGGCTCT CGCACGCGGC GAACTACCTG TACATGCTCT CCGGCGAGGT ACCGGGCGAG
GAGCGGGTGC GGGCCCTGGA GACCTACCTG AACACCGTCT CCGATCACGG CATGAACGCC
TCCACCTTCG CGGCGAGGGT GATCTCCTCC ACCGGATCCG ACCTGATCTC GGCGGTCGTG
GGGGCTATCG GCGCGCTGAA GGGGCCGCTT CACGGGGGCG CGCCGGGCCC AGCGCTCGAC
GTGGTCTTCG AGATCGGGGA GCCCGGGCGC GCTGAGGGCG TCCTGCGGGA GAGACTCGAC
CGCGGCGAGA GGCTCATGGG CTTCGGCCAC CGCGTCTACA AGGTACGAGA CCCCCGGGCA
GACGTGCTGG CCGGGGCGGC GGAGCGGCTC TACGCCTCCG ACGCCGACGA GGAACTCTAC
CGGCTCGCCC TCGAGGTCGA GAGGACCGCG CTGAGGCTGC TCGAAGAGTA CAAGCCGGGG
CGCAACCTCG ACACCAACGT CGAGTTCTAC ACCGCGCTCC TGCTGCACGG GCTCGGGCTG
CCGACCGGGC TGTTCACGCC CACCTTCGCC GTGGGGCGGG TCGCGGGATG GACGGCGCAC
TGCCTGGAGC AGCGCGAGAC GGGACGGCTC ATCAGGCCGC AGTCGGAGTA CGTCGGCCCC
GAGGCCCGGA AGTGGGTGCC GCTGGAGGAG CGGTAG
|
|---|
| Protein sequence | MKGAAHARSE REPGVEVSGG AAFAPGLEGV VATRTRLSMV DGAAGRLVIA GFPVEELAGR
ASFEETLYLL WNGVLPDAGR LEGLRGDLAA RRALPEAAGE VLEAAVAGGA APIDALRMAA
GTLAPSGNDR DDALTSVAAF PTIVAACWRL SQGREPVEPD PGLSHAANYL YMLSGEVPGE
ERVRALETYL NTVSDHGMNA STFAARVISS TGSDLISAVV GAIGALKGPL HGGAPGPALD
VVFEIGEPGR AEGVLRERLD RGERLMGFGH RVYKVRDPRA DVLAGAAERL YASDADEELY
RLALEVERTA LRLLEEYKPG RNLDTNVEFY TALLLHGLGL PTGLFTPTFA VGRVAGWTAH
CLEQRETGRL IRPQSEYVGP EARKWVPLEE R
|
|---|
| |