| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_2542 |
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| Symbol | |
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| ID | 4115602 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rubrobacter xylanophilus DSM 9941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008148 |
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| Strand | - |
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| Start bp | 2565047 |
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| End bp | 2565859 |
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| Gene Length | 813 bp |
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| Protein Length | 270 aa |
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| Translation table | 11 |
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| GC content | 78% |
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| IMG OID | 638037313 |
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| Product | peptidase C60, sortase A and B |
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| Protein accession | YP_645271 |
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| Protein GI | 108805334 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3764] Sortase (surface protein transpeptidase) |
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| TIGRFAM ID | [TIGR01076] LPXTG-site transpeptidase (sortase) family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0900562 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAGGGACG ACCCGCTGCT GCGGCTCGGG GTTGCCCTGC TGGCCGCGGC CCTGCTCGTC
GGGGCCGCGG CCGTCGCTGC GGCGCTCGCC CTGCGCGACG CGCCCGCCGG AGGGCAGGCC
GCGCGCGGGC CCGGCGGGGA GGAGCGGCCG GTCGTGGCGG CGCGCCCCGA GCCGGAGGGC
ACGGCCCCCT GGGTGGAGGG GGAGGCGCCG GGGAGGGGGG AGAGGGATGC GGCCCCCCCG
GGCGCGCCCG GAAGAGCACG GCCCGGCGCT CCTCCTTCCG AAGGGCGGGA GCCGCGGAGG
GCGCAGAGCC TCCCCGTGGC CCGGGCCGGC TGGCCCATGC CCACCCCGGG GGAGCTCGAG
GCCGCCTCCG GCCCCCGGCG CTACCGGCTC CCGCCGGGCG CCATCCTCGC GCTCACCGTG
GAGGACATCG GCCTCTACCG GGCCCCCGTG TGGAACACCG ACGCGCGGTG GGCCCTGGAC
AGCGGCGTGA TCCACGTCCC CGAGACCTCC CTGCCCTGGA GCGAAACCCC CGAGCGCAAC
GTCTACCTCG CCGGGCACCG GCTGGGCTAC CCGGGGACGG GGAGCCGGCT CATCTTCTAC
CGCCTCGACG AGCTGGAGCG GGGCGACAGG GTGCTCCTCG AAGACCGCCG GGGCCGCCGC
TACGAGTACA GGGTGACCCA GAAGTTCGTC GTCGGGCCCC GCGACTCCTG GGTCATGGGG
CGGGTGCGCG GCCGCGACAT GGTGACGCTG CAGACCTGCA CCCCCATCCC CGCCTTCGAC
CGCCGCCTCA TAGTGCGGGC GGACCGCGTG TAG
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| Protein sequence | MRDDPLLRLG VALLAAALLV GAAAVAAALA LRDAPAGGQA ARGPGGEERP VVAARPEPEG
TAPWVEGEAP GRGERDAAPP GAPGRARPGA PPSEGREPRR AQSLPVARAG WPMPTPGELE
AASGPRRYRL PPGAILALTV EDIGLYRAPV WNTDARWALD SGVIHVPETS LPWSETPERN
VYLAGHRLGY PGTGSRLIFY RLDELERGDR VLLEDRRGRR YEYRVTQKFV VGPRDSWVMG
RVRGRDMVTL QTCTPIPAFD RRLIVRADRV
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