Gene Rxyl_2540 details

Gene Information

• Locus tag: Rxyl_2540
• ID: 4115600
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rubrobacter xylanophilus DSM 9941
• Kingdom: Bacteria
• Replicon accession: NC_008148
• Strand: -
• Start bp: 2561488
• End bp: 2563545
• Gene Length: 2058 bp
• Protein Length: 685 aa
• Translation table: 11
• GC content: 72%
• IMG OID: 638037311
• Product: hypothetical protein
• Protein accession: YP_645269
• Protein GI: 108805332
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG1331] Highly conserved protein containing a thioredoxin domain

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.352542
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGGATACCG TGGCCAACCG GCTGGCGAAC GAGACGAGCC CCTATCTCTT GCAGCACAAG 
GACAACCCGG TGGACTGGTA CCCCTGGGGC GAGGAGGCGC TCCGGAGGGC CCGCAGGGAG 
GACAAGCCCA TCCTGCTCTC CGTCGGGTAC TCCTCGTGCC ACTGGTGCCA CGTGATGGAG 
CGCGAGTCCT TCGAGGACGA GGAGACCGCG CGCATCATGA ACGAGCACTT CGTCAACATA 
AAGGTGGACC GCGAGGAGCG GCCGGACATA GACTCGATCT ACATGTCCGC CCTGCAGGCC 
ATGACCCGCG GCGGGGGCTG GCCGATGACG GTCTTCCTCA CCCCCGAGGG GGTTCCCTTC 
TACGCCGGCA CCTACTTCCC GCCCGAGCCG CGCGGGGGGA TGCCCTCCTT CAAGCAGGTG 
CTCCTCACCC TCGCCGACGC CTACCGGAAC CGCCGGGAGG AGGTGCTGCG GAGCGCCGAG 
AGCGTCCGGG AGTTTCTGAG GGCCTCGACG ACCGCCGAGA TGCCCCGCGG CAGGCTCCGG 
GAGGAGCTGC TCGACGGGGC GGCGGAGGCC CTCATGCGCC AGCTCGACCG GCGCTTCGGG 
GGGTTTGGCG GGGCGCCCAA GTTCCCCCAG CCGATGAGCC TGGAGGTTCT CCTGCGCCAC 
CACCGCCGCA CCGGGGACCG GGAGGCCCTC GCCGGCGTCG AGCTCACCCT GCGGTCGATG 
GCCCGCGGCG GCATCTACGA CCAGCTCGGC GGCGGCTTCC ACCGCTACGC CGTGGACGGG 
CGCTGGCTCG TGCCCCACTT CGAGAAGATG CTCTACGACA ACGCCCTGCT CTCCCGGCTG 
TACCTGGAGG CCTACCAGGC CACGGGCGAC GGGTTCTACC GCCGGATCGC CGAGGAGACC 
CTCGACTACG TGGCGCGCGA CATGCGGGGC CCCGAGGGGG GCTTCTACTC GGCGGAGGAC 
GCGGACTCCG AGGGAGAGGA GGGGAAATTC TACGTCTGGA CCCCCCGGGA GCTGCGGGAG 
GCGCTCGGGA GCGAGGACGC CTCGCTCGCG GCCGCCTACT GGGGGGTGAC CGAGCGCGGG 
AACTTCGAGG GCAGAAACGT CCTGCACGTC CCCCGGGAGC CCGAGGAGGT CGCCCGGGAG 
GTCGGCCTCT CCCCGGGGGA ACTCGGCCGG AGGGTGCGGG AGATCCGCCG GCGCCTCCTC 
GAGGCCCGGG GCCGGCGGGT CCGGCCGGGC CGGGACGAGA AGGTGCTCGC CGCCTGGAAC 
GGCCTGATGC TCCGCTCCTT CGCCTTCACC GCCCGCGTCC TGCGCCGGGA GGACTACCTG 
CGCATCGCCT GCGAGAACGC CGCCTTTCTC CTGGGGAGAC TCCTCTCCCC GGAGGGCCGG 
CTGCTCCGCT CCTACAGGGA CGGCCGGGCG CGCATAGCCG GCTACCTGGA GGACTACGCG 
ATGGTCGCCG ACGGCCTCGT CTCCCTCTAC GAGGCCACCT TCGAGACCCG CTGGCTGCGG 
GAGGCCATCT CCCTGGCCGA CGCCATGGAC GAGCTCTTCT GGGACGAGAG CGCGGGGGCC 
TTCTTCGACG CGCCCGCCGG CGGCGAGGAG CTCGTCACCC GCCCGCGCGA CGTCTACGAC 
AACGCCACCC CCTCCGGGAC CTCCGTGGCG GTCGACGTGC TGCTGCGGCT CGCCCTGCTG 
CTGGGGAGGG AGGACTACCG GCGGCGGGCC GAGGCCGCGC TGGAGGGGCT GAGCGGCCTG 
CTGGAGCAGA TGCCCGCCGC CTTCGGTCGG CTGCTCGGGG CGCTGGACTT CCACCTCGGC 
CGGCCGCGGG AGGTGGCCAT CGTGGGGCGT CCGGACGCCC CGGACACCCG GGCGCTGGTG 
GACGCCCTCT ACTCCGTCTA CCTGCCCAAC CGGGTGATCG CCGGGGGCCC CGGCGGCGAG 
GACGCCTCCC TCGTCCCGCT GCTCGAGGGC CGGGGCATGG TGGACGGGAG GGCCACGGCC 
TACGTGTGCG AGGGGTACGT CTGCAAGAGC CCGACGACCG AGCCCGGCGA GCTGCTGCGC 
CAGCTCAGGG AGGGCTGA 

 

Protein sequence

MDTVANRLAN ETSPYLLQHK DNPVDWYPWG EEALRRARRE DKPILLSVGY SSCHWCHVME 
RESFEDEETA RIMNEHFVNI KVDREERPDI DSIYMSALQA MTRGGGWPMT VFLTPEGVPF 
YAGTYFPPEP RGGMPSFKQV LLTLADAYRN RREEVLRSAE SVREFLRAST TAEMPRGRLR 
EELLDGAAEA LMRQLDRRFG GFGGAPKFPQ PMSLEVLLRH HRRTGDREAL AGVELTLRSM 
ARGGIYDQLG GGFHRYAVDG RWLVPHFEKM LYDNALLSRL YLEAYQATGD GFYRRIAEET 
LDYVARDMRG PEGGFYSAED ADSEGEEGKF YVWTPRELRE ALGSEDASLA AAYWGVTERG 
NFEGRNVLHV PREPEEVARE VGLSPGELGR RVREIRRRLL EARGRRVRPG RDEKVLAAWN 
GLMLRSFAFT ARVLRREDYL RIACENAAFL LGRLLSPEGR LLRSYRDGRA RIAGYLEDYA 
MVADGLVSLY EATFETRWLR EAISLADAMD ELFWDESAGA FFDAPAGGEE LVTRPRDVYD 
NATPSGTSVA VDVLLRLALL LGREDYRRRA EAALEGLSGL LEQMPAAFGR LLGALDFHLG 
RPREVAIVGR PDAPDTRALV DALYSVYLPN RVIAGGPGGE DASLVPLLEG RGMVDGRATA 
YVCEGYVCKS PTTEPGELLR QLREG