| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_2477 |
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| Symbol | |
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| ID | 4114744 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rubrobacter xylanophilus DSM 9941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008148 |
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| Strand | - |
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| Start bp | 2492943 |
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| End bp | 2494574 |
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| Gene Length | 1632 bp |
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| Protein Length | 543 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 638037258 |
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| Product | thiamine pyrophosphate enzyme-like TPP binding region |
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| Protein accession | YP_645216 |
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| Protein GI | 108805279 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.374586 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGGGTG CGGGAGAGGC GATAGTGGAG ATGCTGGGGG TGGCGGGGGT GCGGCGCTTC
TACACCGTGC CGGGGGAGAG CTTTCTGGAG GTGCTCGACG CCGCGGAGAG GCACCCGGAC
GTGCGCCTCA TCTCCACCCG CCACGAGTCC GGGGCCTCCT TCATGGCCGA GGCGGAGGCG
AGGCTTACGG GCGTCCCGGC GGTGGCGATG GCCACGCGGG GGGTGGGGGC CTCCAACCTG
GCCATAGGGG TGCACACCGC GAGGCAGGAC TCGACGCCGA TGGTGGTCCT GCTGGGGCAG
GTGGAGAGAG GGCATCTGGG GCGGGAGGCC TTTCAGGAGG TGGACCTTGC GGGCTTCTAC
GGCCCGCTGA CGAAGTGGTC TGCCACGGTG CACGAGGCGG GGAGGCTGGA GGAGCTGCTC
GCGAGGGCGC TGCGGGTGGC CGTCTCCGGG CGGCCGGGGC CGGTGATGCT TGCGCTCCCG
GCCGACGTTC TGGGCGAGGA GGTCGCTTTC TCTGCCGGAG GGGAGGGGGC GAGGGGCTTC
GGCGTCGCCC GCCCTGCGCC CCCGGCGCAG GAGGTGAGGC GCGCCGCGCG CCTTCTCGGG
GCGGCGCGCC GCCCGGTGGT CATCGCGGGG GAGCTCTCCG GGGAGGCGCG CGGGGAGCTT
GTGGCGCTGG CCGAGCGCTA CGACGCGGGG GTCTACACCG CCTTCCGCCG CCAGGACCGC
TTCCCCAACG GGCACGCGAA CTACCTGGGG CACCTCGGGC TCGGGACCCC TCCCCCGGTG
CTGCGGGCGC TCGAGGGGGC GGATGTGGTG CTCTGCGCGG GCTGCAGGCT CGATGAGGCC
ACGACCCAGG GCTATGCGCT TCCGCGCCGG GACCAGGCGC TCATCCTCAT CCACCCCGAG
CCGGAGGGGG TGCCCTTCCG GGCGGAGGTT GCCATGGCCG CCGGCGTGAG GGAGGCGCTC
GCCGGGCTGC TGGAGCTCGC CCCCCGCAGG GCGCCGGAGA GGGGGTGGGA AGAGGCGCGC
CGGGCCTACC TGGAATCCTG CGGCGTTCCC CCCTCCCGCG CGCGTGGTGG CGGGGTGGAC
CCGGCCAGGG CGGTGGCGGC GCTCAGGGAG GCGGTGCCGG AGGATGCCGT CGTGGCGAAC
GACGCGGGCA ACTTCTCGCT CTTCCTGCAC CGCCACTGGT CCTACGATTG CCCGCGCACC
CAGCTTGCCC CCGCAAACGG GGCCATGGGG TATGGGGTGC CCGCGGCCAT CGCCGCAGGG
CTCGTCCTCC CCGCAGAGCG GTGCGTCGTC GCGGTGTGCG GCGACGGGGG CTTTTTGATG
ACGGGGCAGG AGCTTGAGAG CGCGGTGCGC TACGGGGTCT CGGTGGCGGT GGTGGTCTTC
CGCAACGGGC TGCACGGCAC CATAGCCATG CACCAGCTGA AGGCCCTGGG GCGGACGGCG
GGGGTGGAGA TAGGGGAGGT GGACCTTGCG GCCTACGCGC GCAGCCTGGG GGCCGCGGGG
TACGCGGTGC GGGAGGAGGG GGAGCTTAAG GACGCCTTCC GGGAGGCGCT TTGCGCCGGG
CGCCCGGCGC TCGTGGACGT GCTCGTAGAC CCCGAGATCA TCACGCCCGA GGCGCGGCTG
CAGGAGCTCT GA
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| Protein sequence | MAGAGEAIVE MLGVAGVRRF YTVPGESFLE VLDAAERHPD VRLISTRHES GASFMAEAEA
RLTGVPAVAM ATRGVGASNL AIGVHTARQD STPMVVLLGQ VERGHLGREA FQEVDLAGFY
GPLTKWSATV HEAGRLEELL ARALRVAVSG RPGPVMLALP ADVLGEEVAF SAGGEGARGF
GVARPAPPAQ EVRRAARLLG AARRPVVIAG ELSGEARGEL VALAERYDAG VYTAFRRQDR
FPNGHANYLG HLGLGTPPPV LRALEGADVV LCAGCRLDEA TTQGYALPRR DQALILIHPE
PEGVPFRAEV AMAAGVREAL AGLLELAPRR APERGWEEAR RAYLESCGVP PSRARGGGVD
PARAVAALRE AVPEDAVVAN DAGNFSLFLH RHWSYDCPRT QLAPANGAMG YGVPAAIAAG
LVLPAERCVV AVCGDGGFLM TGQELESAVR YGVSVAVVVF RNGLHGTIAM HQLKALGRTA
GVEIGEVDLA AYARSLGAAG YAVREEGELK DAFREALCAG RPALVDVLVD PEIITPEARL
QEL
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