| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_2415 |
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| Symbol | |
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| ID | 4115374 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rubrobacter xylanophilus DSM 9941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008148 |
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| Strand | + |
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| Start bp | 2428644 |
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| End bp | 2429411 |
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| Gene Length | 768 bp |
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| Protein Length | 255 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 638037195 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_645155 |
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| Protein GI | 108805218 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0149136 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGACCTGA AGCTGGAGGG AAAGTCCTTC GTCGTGGGAG GGGCCAGCCG GGGCATCGGC
CGGGCCGTGG CCCGGGAGCT GGCCTCCGAG GGCGCCCGGG TGCTCCTGGT CGCGCGGGAC
ACGGAAGCCC TGGAGGAGGC CGCTCGAGAG CTGGGGGAGC GGGCCGAGCC CTGCGCGGCC
GACCTCTCGG ACCGGGCGGG GGTGGACAAG GTGGCCGCCG CCGCGGGCCG CATGGACGGG
CTGGACGGGG TGCTGGTGAA CGCCGGCGGG CCGCCCTTCG GGAACGCCCT GAACCTCACC
GACGAGCAGT GGATCGAGGC GTTCCGGCTG CTCATCGGGG GGCCGGTGCG CCTGCTGCGG
GACCTCGCCC CCCTCATGAA CGAGGGGGCC TCGGTCTTGT TCATCACCTC CTCCTCGGTC
CGCCAGCCGA TAGACGGCCT GGACGCCTCG AACGTCCTGC GCCCCGGGGT GGCGGCGCTG
GCGAAGTGCC TGGCGCGGGA GCTGGGGCCG CGGGTGCGGG TGAACAGCCT GGCCCCCGGC
AGGATCGACA CCGCCCGCTC CCGCTCGCTC GACGAGGCGC ACGCGCAGGA GCGGAACGTC
CCGCTGGAGG AGTACCGCCG CTCCCTCGCC GCGAGCATCC CGCTCGGGCG CTACGGGCGG
CCGGAGGAGC TCGCGCGGGC CGCGGCCTTT CTCCTCTCCC CCGCCGCCTC CTACATCACC
GGGGCGTCGC TGCAGGTGGA CGGCGGCCTG ATCTCCGCGG TCCCCTGA
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| Protein sequence | MDLKLEGKSF VVGGASRGIG RAVARELASE GARVLLVARD TEALEEAARE LGERAEPCAA
DLSDRAGVDK VAAAAGRMDG LDGVLVNAGG PPFGNALNLT DEQWIEAFRL LIGGPVRLLR
DLAPLMNEGA SVLFITSSSV RQPIDGLDAS NVLRPGVAAL AKCLARELGP RVRVNSLAPG
RIDTARSRSL DEAHAQERNV PLEEYRRSLA ASIPLGRYGR PEELARAAAF LLSPAASYIT
GASLQVDGGL ISAVP
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