Gene Rxyl_2401 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRxyl_2401 
Symbol 
ID4115360 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRubrobacter xylanophilus DSM 9941 
KingdomBacteria 
Replicon accessionNC_008148 
Strand+ 
Start bp2411982 
End bp2413097 
Gene Length1116 bp 
Protein Length371 aa 
Translation table11 
GC content69% 
IMG OID638037181 
Product2-methylcitrate synthase 
Protein accessionYP_645141 
Protein GI108805204 
COG category[C] Energy production and conversion 
COG ID[COG0372] Citrate synthase 
TIGRFAM ID[TIGR01800] 2-methylcitrate synthase/citrate synthase II 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.612256 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCCGAAGA AGAGCGTCGG GCTGTCGGGG GCGATCGCCG GGGACACCGC GATCTGTACG 
GTCGGAAGCT CGGGCGACAG CCTGGAGTAC CGCGGCTACC CCATAGAGGA GCTCGCCGAG 
AGGGCCACCT TCGAGGAGGT CATGCACCTC CTCATCCGGG GAGAGCTGCC GGACAGGAGG 
CAGCTCGAGG AGTACACCGG CAGGCTCTCC GGGATGCGAA AGATCCCGCA GGAGCTAAGG 
GACGTGCTGG AGCGCATCCC GGCCTCGACC CACCCGATGG AGGTGCTGCG CACCGGCTGC 
TCGATGCTGG GCACCCTCGA GCACGAGGGG GAGGGGCGGG ACGCGCGGGA GATCGGGGAG 
CGGCTCATCT CCTGCCTGCC CTCGGTGCTC CTCTACTGGC ACCACTTCGC CGGGAGCGGC 
AAGAGGATCG AGACCGACAC CGGGGAGCAC TCCCTCGCCG GGCACTTCCT GCGCCTGCTG 
CACGGGAGGG AGCCGGGCGA GGAGGAGCGC CGGGCGGTCG ACGTCTCGCT CATCCTCTAC 
GCCGAGCACG AGTTCAACGC CTCGACGTTC ACCGCGAGGA TCATCGCCTC CACCGGCTCG 
GACTTCTACT CCGCGATCAC CGGCGCGATA GGCGCGCTGC GCGGCCCGCT GCACGGCGGG 
GCGAACGAGG CCGCGATGGC GTTCATCGAG CGCTTCCGGA GCGCCGAGGA GGCCGAGAGG 
GGGCTGCGCG AGGCGCTCTC GCGCGGCGAG CGGCTGATGG GCTTCGGGCA CCCGGTCTAC 
ACCCGCGTGG ACCCCCGCTC GGACATCATA AAGGGCTGGT CCAGGCGGCT CTCCGAGGGG 
CACGAGGAGG GATACCTCTA CGAGGTGAGC GAGCGGATCG AGCGGATCTT GCACGAGGAG 
AAGAACCTCT TCCCCAACCT GGACTTCTAC AGCGCCTCGG CGTACCGCTT CTGCGGGATC 
CCCACGGAGA TGTTCACCCC GCTCTTCGTC TTCTCGCGCA CCTCGGGGTG GACGGCGCAC 
GTCATAGAGC AGCGGGAGTC CGGCAAGATC ATCCGCCCCT CGGCCAACTA CACGGGTCCC 
GAGAGAAGGC CCTTCGTCCC GCTGGAGGAG CGCTAG
 
Protein sequence
MPKKSVGLSG AIAGDTAICT VGSSGDSLEY RGYPIEELAE RATFEEVMHL LIRGELPDRR 
QLEEYTGRLS GMRKIPQELR DVLERIPAST HPMEVLRTGC SMLGTLEHEG EGRDAREIGE 
RLISCLPSVL LYWHHFAGSG KRIETDTGEH SLAGHFLRLL HGREPGEEER RAVDVSLILY 
AEHEFNASTF TARIIASTGS DFYSAITGAI GALRGPLHGG ANEAAMAFIE RFRSAEEAER 
GLREALSRGE RLMGFGHPVY TRVDPRSDII KGWSRRLSEG HEEGYLYEVS ERIERILHEE 
KNLFPNLDFY SASAYRFCGI PTEMFTPLFV FSRTSGWTAH VIEQRESGKI IRPSANYTGP 
ERRPFVPLEE R