| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_2394 |
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| Symbol | |
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| ID | 4115640 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rubrobacter xylanophilus DSM 9941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008148 |
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| Strand | + |
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| Start bp | 2405045 |
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| End bp | 2405857 |
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| Gene Length | 813 bp |
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| Protein Length | 270 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 638037174 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_645134 |
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| Protein GI | 108805197 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.883346 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCAAAACG GTACAGGCGA CCAACACTGG AAAGGTGAGA AGATGGGCAG ACTCAGCGGT
CGGGTTGCGG TTGTCACGGG AGCGGCGCGG GGCATAGGCG CTGCGGAGGC CATCCGGCTG
GCGCAGGACG GGGCGAGCGT GGCGGTGCTG GACCTGTCCG CCGAGGCGTG CGGCGAGACG
GTGGAGGCGG TAGAGGCCAC CGGCGCGGAG GCTCTCGCCC TGGCGTGCGA CGTATCCGAT
GCCGGGCAGG TGGAGGGCGC GCTCGAGGAG GTCGTGGGGC GCTTCGGGCG GCTGGACATC
CTGGTGAACA ACGCCGGGAT CATCCGGGAC AACCTCTCGT TCAAGATGAG CGAGGAGGAC
TGGGACCTGG TGCTCGACGT CCACCTCAAG GGCAGCTTTC TGTGCTCCCG GGCGGCCCAG
AAGTACATGG TGGAGCAGAA CTACGGCAAG ATAGTCAACA CCAGCTCCGT GGTGGCGCTC
GGCAACCGGG GGCAGGCCAA CTACTCCTCG GCGAAGGCCG GGCTGCAGGC GCTCACCCGC
ACGCTCGCGC TGGAGCTGGG GCGCTTCAAC ATAAACGTCA ACGCGGTCGC CCCCGGCTGG
ATCGAGACGG AGATGACCAA GGAGGCCGCC GAGCGGGTGG GGATGACCAT AGAGGAGATG
AAGGAGAAGT TCGCAAAGAC CATCCCCCTC AGGCGCTTCG GGCGGGTGGA CGACATCGCC
AACGTGGTGG CCTTCCTGGT CTCCGACGAG GCCTCCTACA TAAGCGGCGA GACGATCTAC
GTGGCCGGGG GTCCGGCGAG CGCGGTCGTC TAG
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| Protein sequence | MQNGTGDQHW KGEKMGRLSG RVAVVTGAAR GIGAAEAIRL AQDGASVAVL DLSAEACGET
VEAVEATGAE ALALACDVSD AGQVEGALEE VVGRFGRLDI LVNNAGIIRD NLSFKMSEED
WDLVLDVHLK GSFLCSRAAQ KYMVEQNYGK IVNTSSVVAL GNRGQANYSS AKAGLQALTR
TLALELGRFN INVNAVAPGW IETEMTKEAA ERVGMTIEEM KEKFAKTIPL RRFGRVDDIA
NVVAFLVSDE ASYISGETIY VAGGPASAVV
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