Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rxyl_2378 |
Symbol | |
ID | 4115624 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rubrobacter xylanophilus DSM 9941 |
Kingdom | Bacteria |
Replicon accession | NC_008148 |
Strand | - |
Start bp | 2387050 |
End bp | 2387865 |
Gene Length | 816 bp |
Protein Length | 271 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 638037158 |
Product | beta-lactamase-like protein |
Protein accession | YP_645118 |
Protein GI | 108805181 |
COG category | [R] General function prediction only |
COG ID | [COG0491] Zn-dependent hydrolases, including glyoxylases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAGCTCT TTGTTCTGGA CAACGGGACC CTCGAGCTGG ACATGGCCTG GCTGGTCTTG AACCCCAAGC CGGCCACCGT GGACAACAAG CACCCGCAGG CCGACTGGGT CACCATCCCC ACCTACACCG TCCTCGTCGA GCACCCCGAC CTCGGCTGGG TGCTCTTCGA CGGCACCTGC CACCCCGAGT GGGAGAGCCG CTGGCCGGAG GCGCTGCAGC CCATCTTCCC CTACCGGGCC GAGGAGCGGC AGTACCTGCC GATGCAGCTC GAGCAGCTCA ACCTCAAGAT GAGCGACATA GACATCGTGG TCATCTCCCA CCTGCACCTC GACCACTGCG GGTGCCTGGA CTTCTTCCGC GGGACGAAGG CCGGCAGGCG CGGGATCATC GTCCACGACG CCGAGTTCGC CCACGCGCTC AAGGTCACCC ACAAGGGCCC GGTGGACTAC GCCGGGGCCT ACGTCAAGGG CGACTTCGAC ATGCCCAACC TGAACTACGA CCTGATGCTC GGGCCGCACC TGGAGCTGGC CCCGGATCTG CACCTCTACC ACTGGCCGGG GCACACGCCG GGCCTGATCG GGATGGTCGC CCACACCGAG CACTCGGGCA CCTTCATCTT CACCTCGGAC GCCATCTACC TGGAGCGGAA CCTGAAGGAG TGGGTGCTCT CGGGGATCGT CTACGACACG GTGGCGTACT TCAACTCGAT GTACCAGATA AAGCAGCTCG CCCGCAAGCA CGACGCGACC CTGGGCTACG GGCACGACAT GGAGAAGTTC AGGGCCCTCA AGAAGGCCCC CGAGTACTAC GAGTAG
|
Protein sequence | MKLFVLDNGT LELDMAWLVL NPKPATVDNK HPQADWVTIP TYTVLVEHPD LGWVLFDGTC HPEWESRWPE ALQPIFPYRA EERQYLPMQL EQLNLKMSDI DIVVISHLHL DHCGCLDFFR GTKAGRRGII VHDAEFAHAL KVTHKGPVDY AGAYVKGDFD MPNLNYDLML GPHLELAPDL HLYHWPGHTP GLIGMVAHTE HSGTFIFTSD AIYLERNLKE WVLSGIVYDT VAYFNSMYQI KQLARKHDAT LGYGHDMEKF RALKKAPEYY E
|
| |