Gene Rxyl_2378 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRxyl_2378 
Symbol 
ID4115624 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRubrobacter xylanophilus DSM 9941 
KingdomBacteria 
Replicon accessionNC_008148 
Strand
Start bp2387050 
End bp2387865 
Gene Length816 bp 
Protein Length271 aa 
Translation table11 
GC content65% 
IMG OID638037158 
Productbeta-lactamase-like protein 
Protein accessionYP_645118 
Protein GI108805181 
COG category[R] General function prediction only 
COG ID[COG0491] Zn-dependent hydrolases, including glyoxylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGCTCT TTGTTCTGGA CAACGGGACC CTCGAGCTGG ACATGGCCTG GCTGGTCTTG 
AACCCCAAGC CGGCCACCGT GGACAACAAG CACCCGCAGG CCGACTGGGT CACCATCCCC
ACCTACACCG TCCTCGTCGA GCACCCCGAC CTCGGCTGGG TGCTCTTCGA CGGCACCTGC
CACCCCGAGT GGGAGAGCCG CTGGCCGGAG GCGCTGCAGC CCATCTTCCC CTACCGGGCC
GAGGAGCGGC AGTACCTGCC GATGCAGCTC GAGCAGCTCA ACCTCAAGAT GAGCGACATA
GACATCGTGG TCATCTCCCA CCTGCACCTC GACCACTGCG GGTGCCTGGA CTTCTTCCGC
GGGACGAAGG CCGGCAGGCG CGGGATCATC GTCCACGACG CCGAGTTCGC CCACGCGCTC
AAGGTCACCC ACAAGGGCCC GGTGGACTAC GCCGGGGCCT ACGTCAAGGG CGACTTCGAC
ATGCCCAACC TGAACTACGA CCTGATGCTC GGGCCGCACC TGGAGCTGGC CCCGGATCTG
CACCTCTACC ACTGGCCGGG GCACACGCCG GGCCTGATCG GGATGGTCGC CCACACCGAG
CACTCGGGCA CCTTCATCTT CACCTCGGAC GCCATCTACC TGGAGCGGAA CCTGAAGGAG
TGGGTGCTCT CGGGGATCGT CTACGACACG GTGGCGTACT TCAACTCGAT GTACCAGATA
AAGCAGCTCG CCCGCAAGCA CGACGCGACC CTGGGCTACG GGCACGACAT GGAGAAGTTC
AGGGCCCTCA AGAAGGCCCC CGAGTACTAC GAGTAG
 
Protein sequence
MKLFVLDNGT LELDMAWLVL NPKPATVDNK HPQADWVTIP TYTVLVEHPD LGWVLFDGTC 
HPEWESRWPE ALQPIFPYRA EERQYLPMQL EQLNLKMSDI DIVVISHLHL DHCGCLDFFR
GTKAGRRGII VHDAEFAHAL KVTHKGPVDY AGAYVKGDFD MPNLNYDLML GPHLELAPDL
HLYHWPGHTP GLIGMVAHTE HSGTFIFTSD AIYLERNLKE WVLSGIVYDT VAYFNSMYQI
KQLARKHDAT LGYGHDMEKF RALKKAPEYY E