| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_2377 |
|---|
| Symbol | |
|---|
| ID | 4115623 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rubrobacter xylanophilus DSM 9941 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008148 |
|---|
| Strand | + |
|---|
| Start bp | 2385971 |
|---|
| End bp | 2387059 |
|---|
| Gene Length | 1089 bp |
|---|
| Protein Length | 362 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 77% |
|---|
| IMG OID | 638037157 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_645117 |
|---|
| Protein GI | 108805180 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG0392] Predicted integral membrane protein |
|---|
| TIGRFAM ID | [TIGR00374] conserved hypothetical protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.436987 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCGGGGCG CCCTGCTGCG CAACCTGCTC TTTCTGCTCT CCCTCGGCCT GGCGCTCCAC
CTGCTGCTGC CCCGGATACC GGGCGTGGAG CGCTCGCTGG AGCTGGTCTC CCGGGCCTCC
GTCCCCCTGA TCCTGGCCGC CCTCGCCGCC GAGCTGCTGA GCGAGCTCTC CTACGCCGGG
CTCCTCGGGC GCGTGACCGC CGCCGCGGCG AACATCCCGC CGCGCCTGCG CCGCCGGCGC
GGCCTGGGCA GCTGGTACAT GCTGCGGCTG ACCGTGACCG GCTACGGGGC CTCGCACGCC
CTCCCCGGCG GCGGCGCGGC CGGCGCGGCG GTCGCCTACA CCGCGCTGCG CAGCCGGGGC
CTCGAGCGCC GCCGGATCGG GGCGGCCCTC GCGGCCACCT CGGCGCTCGC CTACGGGGCG
CTGGGGACCA TCCTGGCGGC GAGCCTGCTC TACCTGCTCG CCCGCGGGAA CCTGGACCCG
GCGCAGCGGA CGGCGGCCTC GCTCGGCCTC TCCCTCACGC TTGCCGGCTT CGCCGGGAGC
TACGCGGTCT ACCGCAACCC GCTGCCGGCG AGGCTCGCGC TTGAGGGGGC GGCGAAGGGG
CTGCCGGGGC TGCTCGGCGG ATCTGCGCGC GGCCGGCGCC TCGCCGCCGC CCTGGAGCGG
GCCCTGCTCC GCCTCGGGGC CGAGCTCGGC GCCCTGCGGC GGCAGCTCAT GTCCGCCCCT
CCGGCCGAGA TCCTCCGGCT TTGCGCCCTG GCGCTCGGGT TCTGGGCCTT CGACGCGCTG
TGCCTGCTGC TCATGTTCCG GGCCTTCGGC GTCGAGGTGG GCACCGCCGA GCTGCTCGCC
GCCTACGGCA TCGCGACCGC CGCCGGCGCC CTCCCCCTGA CCCCCGGCGG CATCGGGGTC
TTCGAGACAA CCATCCTGAC CGTGCTGGTG CTCTTCGGGA TCGGGCCGGA GGCCACCGTC
CCGGTGCTCG GCTACCGGCT CTTCAACTTC TGGCTGCCCA TACCGCTGGC GGCGCTCCTG
TACCCCACGC TGCACCGCAG GCCGGGCCCG CGGCCCCCGC TCTCGCGCTT CGGGCGGCGC
TACTCGTAG
|
|---|
| Protein sequence | MRGALLRNLL FLLSLGLALH LLLPRIPGVE RSLELVSRAS VPLILAALAA ELLSELSYAG
LLGRVTAAAA NIPPRLRRRR GLGSWYMLRL TVTGYGASHA LPGGGAAGAA VAYTALRSRG
LERRRIGAAL AATSALAYGA LGTILAASLL YLLARGNLDP AQRTAASLGL SLTLAGFAGS
YAVYRNPLPA RLALEGAAKG LPGLLGGSAR GRRLAAALER ALLRLGAELG ALRRQLMSAP
PAEILRLCAL ALGFWAFDAL CLLLMFRAFG VEVGTAELLA AYGIATAAGA LPLTPGGIGV
FETTILTVLV LFGIGPEATV PVLGYRLFNF WLPIPLAALL YPTLHRRPGP RPPLSRFGRR
YS
|
|---|
| |