| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_2333 |
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| Symbol | |
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| ID | 4117551 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rubrobacter xylanophilus DSM 9941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008148 |
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| Strand | - |
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| Start bp | 2342729 |
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| End bp | 2343508 |
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| Gene Length | 780 bp |
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| Protein Length | 259 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 638037113 |
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| Product | gluconate 5-dehydrogenase |
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| Protein accession | YP_645073 |
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| Protein GI | 108805136 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.885017 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGGGTTT TGGAGCTCTT TAATCTCCGG GGCAAGACCG CGATAGTCAC CGGGGGAGGC
CGGGGCCTCG GGCTCTACAT GGCCGAGGCC CTGGCCGAGG CGGGGGCCTC CCTGACGATC
TGCTCCCGCA GGAGGGAGCA GCTGGAGGAA GCGCGGGGGC GCCTGGAGTC GGCCGGGAAG
GGTGGGGTCC TCGCCCTCGG TTGCGACGTG ACCGACCCCG AGCAGGTGGA GGAGGTGGTC
GAGAAGACCG TCGAGGGCTT CGGCTCGGTG GACATAGTCG TCAACAACAG CGGCGCCACC
TGGGGCGCCC CGCCGCTGGA GATGCCGCTG GAGAAGTTCG ACCACGTGCT GCGGGTCAAC
GTCCGCGGCA CCTTCCTCAT GAGCCGCTCG GCGGCCCGCA GGATGATAGA GCGCGGCTCG
GGCGGCGTGA TCGTCAACGT CTCCAGCGTC GCCGGGCTGG TGGGCGGCGA CCCGCGCTAC
ATGCAGACCG TCGGCTACAA CGCCTCGAAG GGTGCGATCA TCTCCATGAC CCGCGACCTG
GCCACCTCCT GGGCCCCCCA CGGGATAAGG GTCAACGCCG TGGCCCCCGG GTGGTTCCCC
ACCAGGATGA GCCGGGGCCT GATCGAACGC CACGAGCGGC AGATGCTGGC GGACATCCCC
ATGAAGCGCT TCGGCGGGCC GGAGGACATA AAGGGCGCCG TGCTGTTCTT GGCCTCCCCC
GCCTCCTCCT ACATGACCGG CCAGACGCTC GTGGTCGACG GCGGGCTGAC CGCCTGGTAG
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| Protein sequence | MGVLELFNLR GKTAIVTGGG RGLGLYMAEA LAEAGASLTI CSRRREQLEE ARGRLESAGK
GGVLALGCDV TDPEQVEEVV EKTVEGFGSV DIVVNNSGAT WGAPPLEMPL EKFDHVLRVN
VRGTFLMSRS AARRMIERGS GGVIVNVSSV AGLVGGDPRY MQTVGYNASK GAIISMTRDL
ATSWAPHGIR VNAVAPGWFP TRMSRGLIER HERQMLADIP MKRFGGPEDI KGAVLFLASP
ASSYMTGQTL VVDGGLTAW
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