| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_2318 |
|---|
| Symbol | |
|---|
| ID | 4117537 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rubrobacter xylanophilus DSM 9941 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008148 |
|---|
| Strand | - |
|---|
| Start bp | 2328305 |
|---|
| End bp | 2330353 |
|---|
| Gene Length | 2049 bp |
|---|
| Protein Length | 682 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 638037099 |
|---|
| Product | small GTP-binding protein domain-containing protein |
|---|
| Protein accession | YP_645059 |
|---|
| Protein GI | 108805122 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0480] Translation elongation factors (GTPases) |
|---|
| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00484] translation elongation factor EF-G |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGCGGTTG AGCCGGCATT GATCCGGAAC GCCTGCCTCG TCGGCCACCG GGGCAGCGGC
AAGACCGCCC TGGCAGAGGG CATGCTTGGT CTTGCATCCG GCAGGAGCGG CCGGGCCTCG
CGCGTGCTGG ACGCGGCGGA GGACGAGTCC GAGCGCGGGA TGACCCTCGG GATGGGCGTC
GTCCAGTTCC AGTGGAAGGG GCGGCAGATA AACCTGCTCG ACACCCCGGG CGACGGCGGG
TTCATCGCCG ACGCCTTCGT CGCGCAGCGG GTGGCGGACC TCGCCATCCT CGTCGTCCAC
GCCCAGGACC CCATACAGGT CGTCACCGAG CGGGTGTGGC GCCGGGGGGA GAGGGAGGAC
ATCCCCCACG TCGTGGCCGT AAACCACCTG GACCGCGAGC GGACGGACTT CGGGGCCGTG
GTCGAGCGGC TGCGGGAGCG GTTCGGGAGT GCCGTTGTGC CGCTCAACCT CCCGGTGGGC
CGCGAGGGCG ACCTGCGGGG GGTCTACGGC CTCCTGACCG ACACCGCCTA CTACGCGGGC
GGCGAGCAGC GGCAGGAGAT CCCCTCCGGC ATGGAGGAGG AGGTCGAGGC TGCGAAGGTC
CAGATCTTCG AGGCCATCGC CGAGAGCGAC GACACCCTGC TAGAGAAGTA CCTCGCCGAC
GAGGAGCTCG GCACCGAGGA GGTCTTCGAG GGGCTCAAAA AGGGCATCGT GGACGGCGTC
ATCATCCCGG TGCTCGCCAC CAGCGCGGAG CGGATGATCG GGGTGGACCG GCTGCTGGAC
CTGCTCGCCG GGAGCGCCCC GAGCCCCGCC GACCGCTCCC GCTGGGTGAC CGCCGACGGC
GACGAGGTGG CCTGCGACCC GGAGGGGCCC TTCTCGGCCT ACGTCTTCAA GACCTACGTC
GACCCCTTCG CCGGGCGGCT GAGCGTGATG CGCGTCATAA GCGGCCGCTG CCGCTCCGAC
GAGCAGCTCG TGAACCCGCG CACCGGCTCC TCGGAGCGGC TGGGCGGGAT CTCACACCTG
GTCGGCCGGG AGCGGCAGGG CGCAGAGGAG GCCGTGGCCG GCGACATCAT CGCCGTCCCC
AAGCTCAGGG ACACCGCCAC CTTCGACACC CTGTGCAAGC CGGAGCACGT GGTCCGCTAC
GAGCCGGTGC CGCTCCCGGA GCCCACCACC GCCTTCGCGG TGCGGGCCAA GTCCCGCGGC
GAGGAGGAGA AGGTCTTCGA CGCCATAAGG CGGGTGGTGG ACGAGGACCC CTCGCTCCGG
CTGGAGCGCT CGGAGGCCAC CGGGGAGGAT ATACTCTCCG GCCTCTCCCA GCTGCACGTG
GAGGTGGCCC TGGAGCGCGT CCTGCGGCGC TACGGCGTCG AGGTCGAGAC CCAGACCCCC
AAGGTCCCCT TCAAGGAGAC CATCGCCGCC TCCTCCCGCG GCCACGGCCG CTACAAAAAG
CAGACCGGCG GCCGCGGCCA GTTCGGGGAC GCCAAGATAG AGATCTCCCC CCTGCCCCGC
GGCGAGGGGT TCGAGTTCGA GGATGCCATC GTCGGCGGGG CCATCCCCCG GCAGTTCATC
CCCGCGGTCG AGAAGGGCGT GCAGGAGGCC ATGCGCGAGG GCCCGATCGC CGGCTACCCC
GTGGTCGACG TGAAGGTCCG CCTCTACGAC GGCCAGTTCC ACCCGGTGGA CTCCTCGGAG
ATGGCCTTCA AGGTGGCCGG GTCGCTCGCC TTCAAGGACG CCGTGGAGAA GGCGCGCCCC
ATCCTGCTGG AGCCCTTCCT GAAGGTCGAG GTGCTCGCCC CCACCGACCT GGTGGGGGAC
ATCATGGGCG ACCTCTCCGG GCGGCGCGGC CGGCCCATGG GCATGGAGCA GCGCGGCGAG
CGGCAGGTGA TCACCGCCGA GGTCCCGCAG GTGGAGATGC TGACCTACGC CCGCGACCTC
CGCTCCATAA CCGGCGGCCG GGCCAACTTC CACGCGGAGT TCAGCCACTA CGAGGAGGTG
CCGCCGAATC TGGTGGAGAA GGTGCTCGCC GCCAACGCGC GCGAGGAGGA AGAGGAGAAG
GTCCGCTAG
|
|---|
| Protein sequence | MAVEPALIRN ACLVGHRGSG KTALAEGMLG LASGRSGRAS RVLDAAEDES ERGMTLGMGV
VQFQWKGRQI NLLDTPGDGG FIADAFVAQR VADLAILVVH AQDPIQVVTE RVWRRGERED
IPHVVAVNHL DRERTDFGAV VERLRERFGS AVVPLNLPVG REGDLRGVYG LLTDTAYYAG
GEQRQEIPSG MEEEVEAAKV QIFEAIAESD DTLLEKYLAD EELGTEEVFE GLKKGIVDGV
IIPVLATSAE RMIGVDRLLD LLAGSAPSPA DRSRWVTADG DEVACDPEGP FSAYVFKTYV
DPFAGRLSVM RVISGRCRSD EQLVNPRTGS SERLGGISHL VGRERQGAEE AVAGDIIAVP
KLRDTATFDT LCKPEHVVRY EPVPLPEPTT AFAVRAKSRG EEEKVFDAIR RVVDEDPSLR
LERSEATGED ILSGLSQLHV EVALERVLRR YGVEVETQTP KVPFKETIAA SSRGHGRYKK
QTGGRGQFGD AKIEISPLPR GEGFEFEDAI VGGAIPRQFI PAVEKGVQEA MREGPIAGYP
VVDVKVRLYD GQFHPVDSSE MAFKVAGSLA FKDAVEKARP ILLEPFLKVE VLAPTDLVGD
IMGDLSGRRG RPMGMEQRGE RQVITAEVPQ VEMLTYARDL RSITGGRANF HAEFSHYEEV
PPNLVEKVLA ANAREEEEEK VR
|
|---|
| |