Gene Rxyl_2294 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRxyl_2294 
Symbol 
ID4117513 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRubrobacter xylanophilus DSM 9941 
KingdomBacteria 
Replicon accessionNC_008148 
Strand
Start bp2308321 
End bp2309397 
Gene Length1077 bp 
Protein Length358 aa 
Translation table11 
GC content72% 
IMG OID638037075 
Productcell wall hydrolase/autolysin 
Protein accessionYP_645035 
Protein GI108805098 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0860] N-acetylmuramoyl-L-alanine amidase
[COG3409] Putative peptidoglycan-binding domain-containing protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCGCACGC TGAGGAGGGG AGACCGGGGC CGGGAGGTCG TGGACCTGCA GACCCGCCTG 
CAGGCGCTCG GCTACGACCT GGGCAACCGG GGCATAGACG GCGTGTTCCG GGAGGAGACC
GAGCTGGCGG TGCGGGCCTT CCAGCAGAGG GTGGGCATCC TGGCCGACGG CCTGGTTGGG
CCGGTGACCT GGAGGGAGCT GGTGGAGGCC GGTTACCGCC CCGGGGGGCG CCTGCTCTAC
CTGCGGCAGC CGCCCTTCAG GGGGGCCGAC GTGATGGAGA TGCAGCGGAT GCTCAACGAC
CTGGGCTTCG ACCCCGGCGC CGTCAACGGC CTCTTCGACG GGCGCACCGC CCGCGCCGTG
CGCGACTTCC AGAAGAACGC GGGGCTCCAG CCCGACGGGG TGGTGGACGG CGCGGTCTTC
AAGACCCTGA GCATCTACGC CGCCCAGACG CTGGGCACGC ACCAGATCCC GGACAAGAAC
GACGGCTTCT TCCCCGAGGA TCTCTTCTCC GGCACGATCG TCATAGACGC GGCCCACGGC
GGGCCGGACC GGGGGCACGT GGCCCCGGGC GGCCTCTCGG AGGCCGACCT CAACCTGGCC
GTGGCCCACG AGCTCGCCCA GATCCTGCCC GCCCGCGAGG TGCTGCTGAC CCGCAGCGAC
GACGAGGAGG TCTCGCAGGC CGACCGGGCC TTTCTGGCCA ACACCTCGGG GGCGAAGATG
ATCGTCTCGC TCCACCACGC CAGCCACCCG AACCCGGCGG CGCGCGGCAC CGCCTCCTTC
TACTTCGAGC GGCTGGGATA CCGGTCCCAC CGGGGCCGGA TGGCGGCCGC CTACCTGCAG
CGCGGGGTGA GCCGGGCCCT GGGGACGAAG GACATCGGGG AGTTCGGCCG CTCGTACGAC
ATCCTGCGCG AGACCAACAT CCCGGCGGTT ATGGTCGAGC TGCTCTACCT CTCCAACCCG
GAGGACCGGC GGCTGGCCAC CGACCGCTAC TACCCGGCCG CGGTGGCCGA GGCGATAACC
AACGCGCTGG AGCAGTACGC GAGCCGGGAC AGGCGGTTCA TCGCCGTCCC CGGCTGA
 
Protein sequence
MRTLRRGDRG REVVDLQTRL QALGYDLGNR GIDGVFREET ELAVRAFQQR VGILADGLVG 
PVTWRELVEA GYRPGGRLLY LRQPPFRGAD VMEMQRMLND LGFDPGAVNG LFDGRTARAV
RDFQKNAGLQ PDGVVDGAVF KTLSIYAAQT LGTHQIPDKN DGFFPEDLFS GTIVIDAAHG
GPDRGHVAPG GLSEADLNLA VAHELAQILP AREVLLTRSD DEEVSQADRA FLANTSGAKM
IVSLHHASHP NPAARGTASF YFERLGYRSH RGRMAAAYLQ RGVSRALGTK DIGEFGRSYD
ILRETNIPAV MVELLYLSNP EDRRLATDRY YPAAVAEAIT NALEQYASRD RRFIAVPG