Gene Rxyl_2262 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRxyl_2262 
Symbol 
ID4115205 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRubrobacter xylanophilus DSM 9941 
KingdomBacteria 
Replicon accessionNC_008148 
Strand
Start bp2273303 
End bp2274277 
Gene Length975 bp 
Protein Length324 aa 
Translation table11 
GC content67% 
IMG OID638037041 
Productnuclease (SNase-like) 
Protein accessionYP_645004 
Protein GI108805067 
COG category[L] Replication, recombination and repair
[R] General function prediction only 
COG ID[COG1525] Micrococcal nuclease (thermonuclease) homologs
[COG1988] Predicted membrane-bound metal-dependent hydrolases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.274888 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGGTGG CAACCCACAT CGTCTTCGGC GAGTGCTGCC TCTTTGCTGC CAGTGCCGTC 
TTCGACTTCC ACTACGAGAC GCCCTCGGTC CTCGCGGCCG CGGTCTGCTC CGTCCTGCCC
GACGCCGACT ACCCCAAGAG CTGGCTCGGC CACCAGCTCG GCGGCGTCTC GGAGGACCTG
TATCGCCTCT TCGGGCACAG GAGCTTCCTG CACTCCCTGC TCGCCCTGCT CCTCGTCACG
GCTGCCCTCG GCCCGCTCCT GTGGTGGCTC ACAGGCCAGC CAGCAACGAT GATCGCAGTC
GGGGTGGGCT ACGGCTCCCA CCTCTTCGCC GACATGATGA CCCTCGGGGG CGTGCAGCTC
TTCTGGCCCT CCCGCGCGAT CGCCGTCTTC CCCGGCCGCG ACGAGTACCG CGTCGTCTCG
GGAGGCAACT CCGAGAGGGC CTTCGTCGCC CTTGCCCTCG CCTTCGCCCT GCTCTTCTAC
CCCGTCTCGC GGGTAGGCTT CGACGGCTTG ATCTACCGCC TGGGCGGAGC AGACACCCTC
TACGGAGAGG TCACCAAGGT CACGGACGGC GACACCATGA CCGTGGAGGT CCAGGGCAGG
AGCACCCCGG TAAGGCTCAT AGGAGTGGAC ACCCCAGAGA CCGTGGCCCC AGAACAACCC
ATCGGATGCT ACGGGCCTGA GGCAAGCGCC TACACGGAGC GAACCCTCCA GGGCCGCCTC
GTGCGGCTCG AGATCCCACG GGTAGGAGAC TCCGAGGACG CCTACGGGCG CACCCTCGCC
TACGTCTGGC TCGACACGGA CGGCGACGGA GAGTACGAGC GCCTCTTCAA CGAGGATCTC
ATAGAGCAGG GATATGCCCG CACCACCACC TTCTCCCACA CCTACCGCCG CGAATTCGAG
CGGGCCAGAG AAGAAGCCGA GGCCAAAGGC GTGGGGCTGT GGGGTGCGTG TCCTTTTCCG
ACTACGGCCC CATAA
 
Protein sequence
MKVATHIVFG ECCLFAASAV FDFHYETPSV LAAAVCSVLP DADYPKSWLG HQLGGVSEDL 
YRLFGHRSFL HSLLALLLVT AALGPLLWWL TGQPATMIAV GVGYGSHLFA DMMTLGGVQL
FWPSRAIAVF PGRDEYRVVS GGNSERAFVA LALAFALLFY PVSRVGFDGL IYRLGGADTL
YGEVTKVTDG DTMTVEVQGR STPVRLIGVD TPETVAPEQP IGCYGPEASA YTERTLQGRL
VRLEIPRVGD SEDAYGRTLA YVWLDTDGDG EYERLFNEDL IEQGYARTTT FSHTYRREFE
RAREEAEAKG VGLWGACPFP TTAP