Gene Rxyl_2140 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRxyl_2140 
Symbol 
ID4114736 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRubrobacter xylanophilus DSM 9941 
KingdomBacteria 
Replicon accessionNC_008148 
Strand
Start bp2161500 
End bp2162033 
Gene Length534 bp 
Protein Length177 aa 
Translation table11 
GC content72% 
IMG OID638036926 
Product50S ribosomal protein L6P 
Protein accessionYP_644896 
Protein GI108804959 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0097] Ribosomal protein L6P/L9E 
TIGRFAM ID[TIGR03654] ribosomal protein L6, bacterial type 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.105025 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGCGTA TCGGAAGGGC GCCGGTCGAG GTCCCGGGCG GGGTGAGCGT GGAGATCTCG 
GCCCGCAGCG TGAAGGTGCG GGGGCCGAAG GGGGAGCTGA CCGTGCCGGT GGGCCGGGGG
GTCAGCGTGC GGGAGGAGGA CGGGAAGCTG CTGGTGGAGC GGTCCTCCGA CGCCCCCCAG
CACCGGGCTA TGCACGGCCT CACCCGCTCC CTGCTGCACA ACGCGGTCGT CGGGGTGACC
GACGGGTTCG CGAAGACGCT GCAGATCTCG GGCGTCGGCT ACCGGGCCCA GCTGCAGGGG
CAGAACGTGG TGCTGCAGGT GGGCTACTCG CACCCGGTGA CCGTCCAGCC GCGGGAGGGG
ATCCAGCTCG AGGTCCCCAA CCCCACCACC ATCGTGGTGC GCGGCATAGA CAAGCAGCAG
GTCGGCCAGA TGGCGGCGGA GATCCGCCGG GTGCGGCCGC CCGAGCCGTA CAAGGGCAAG
GGCATCCGCT ACGAGGGCGA GCAGGTCCGG CGCAAGGTCG GCAAGGCCGG TTAG
 
Protein sequence
MSRIGRAPVE VPGGVSVEIS ARSVKVRGPK GELTVPVGRG VSVREEDGKL LVERSSDAPQ 
HRAMHGLTRS LLHNAVVGVT DGFAKTLQIS GVGYRAQLQG QNVVLQVGYS HPVTVQPREG
IQLEVPNPTT IVVRGIDKQQ VGQMAAEIRR VRPPEPYKGK GIRYEGEQVR RKVGKAG