Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rxyl_2004 |
Symbol | |
ID | 4117592 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rubrobacter xylanophilus DSM 9941 |
Kingdom | Bacteria |
Replicon accession | NC_008148 |
Strand | - |
Start bp | 2025425 |
End bp | 2026603 |
Gene Length | 1179 bp |
Protein Length | 392 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 638036792 |
Product | phosphoglycerate kinase |
Protein accession | YP_644763 |
Protein GI | 108804826 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0126] 3-phosphoglycerate kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.374925 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGACAAGC GGAGCGTGAG GGACCTCGAG CTGCGCGGGA AGAAGGTGCT CGTCCGGGTG GACTTCAACG TGCCGGTAAA GGGCGGCGAG GTGACCGACG ACACCCGCAT CCGGCGGGCG CTGCCCACCA TCCGCTACCT GCTGCAGCGG GGGGCGAGGG TCGCCCTGAT CTCCCACCTG GGCCGCCCGA AGGGCGAGCC CGACCCCCGC TACAGGATGG ACCCCGTGGC CCGGCGGCTC GAGGAGCTGC TCGGGGAGCC GGTCAGGAAG CTGGATACCG CCACGGGCCC TGAGGTCGGC AGGGCGCTGG AGGAGCTGGA GCGGGGCGTG ATCCTGCTGG AGAACTCCCG CTTCTACCCC GGGGAGACAA AGAACGACCC CGCCTTCGCC GCCGAGCTGG CCGGGCCCTT CGACCTCTAC GTCAACGACG CCTTCGGGGC GGCCCACAGG GCCCACGCCA CCACCGTGGG GGTCGCCGAG CGGCTGCCCG CCGCCGCCGG CTTCCTGCTG GAGCAGGAGC TGGACTACCT GGATGGGGTG CTGCGCAGCC CGGAGCGGCC CTTCGTGGCC ATCCTCGGCG GGGCCAAGGT CTCGGACAAG CTGGGGGTCA TCGAGAGCCT GCTCGGGGTG GCCGACCGCC TCCTCGTCGG GGGGGCGATG TGCTTCACCT TCCTGAAGGC CAGGGGCCTC GGGGTCGGAG CCTCGCTGGT CGAGGACGAC TACCTCGGGG AGGCGCGTCG CCTCATGGAG GGGGCCGCCG ACAGGCTCGT GCTCCCGGTG GACGTGGTCG TCGCCGAGAG GATGGAGGAG GGGGCCCGGA CCCGGACCGT CCCGGTGGAG GAGATCCCGG AGGGCTGGAT GGGCCTGGAC ATCGGCCCCC GGACGGTCGA GCTCTTCCGC CGGCACATCC TGCAGGCCAG GACCATCTTC TGGAACGGCC CCATGGGGGT CTTCGAGATC GACGCGTTCG CCAGGGGCAC CGAGGGCGTG GCCAGGGCCG TCGCCGAGAG CGGGGCCACG AGCGTCGTGG GGGGCGGCGA CTCGGTCGCC GCCGTCAGGA AGCTCGGCCT GGAGGACAGG ATGAGCCACA TCTCCACCGG CGGCGGGGCC TCGCTGGAGT ACGTCGAGGG CAGGGAGCTG CCCGGCGTGG CCGTGCTGCC CGAGAGGGAG GAGGTCTAG
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Protein sequence | MDKRSVRDLE LRGKKVLVRV DFNVPVKGGE VTDDTRIRRA LPTIRYLLQR GARVALISHL GRPKGEPDPR YRMDPVARRL EELLGEPVRK LDTATGPEVG RALEELERGV ILLENSRFYP GETKNDPAFA AELAGPFDLY VNDAFGAAHR AHATTVGVAE RLPAAAGFLL EQELDYLDGV LRSPERPFVA ILGGAKVSDK LGVIESLLGV ADRLLVGGAM CFTFLKARGL GVGASLVEDD YLGEARRLME GAADRLVLPV DVVVAERMEE GARTRTVPVE EIPEGWMGLD IGPRTVELFR RHILQARTIF WNGPMGVFEI DAFARGTEGV ARAVAESGAT SVVGGGDSVA AVRKLGLEDR MSHISTGGGA SLEYVEGREL PGVAVLPERE EV
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