Gene Rxyl_2004 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRxyl_2004 
Symbol 
ID4117592 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRubrobacter xylanophilus DSM 9941 
KingdomBacteria 
Replicon accessionNC_008148 
Strand
Start bp2025425 
End bp2026603 
Gene Length1179 bp 
Protein Length392 aa 
Translation table11 
GC content72% 
IMG OID638036792 
Productphosphoglycerate kinase 
Protein accessionYP_644763 
Protein GI108804826 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0126] 3-phosphoglycerate kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.374925 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACAAGC GGAGCGTGAG GGACCTCGAG CTGCGCGGGA AGAAGGTGCT CGTCCGGGTG 
GACTTCAACG TGCCGGTAAA GGGCGGCGAG GTGACCGACG ACACCCGCAT CCGGCGGGCG
CTGCCCACCA TCCGCTACCT GCTGCAGCGG GGGGCGAGGG TCGCCCTGAT CTCCCACCTG
GGCCGCCCGA AGGGCGAGCC CGACCCCCGC TACAGGATGG ACCCCGTGGC CCGGCGGCTC
GAGGAGCTGC TCGGGGAGCC GGTCAGGAAG CTGGATACCG CCACGGGCCC TGAGGTCGGC
AGGGCGCTGG AGGAGCTGGA GCGGGGCGTG ATCCTGCTGG AGAACTCCCG CTTCTACCCC
GGGGAGACAA AGAACGACCC CGCCTTCGCC GCCGAGCTGG CCGGGCCCTT CGACCTCTAC
GTCAACGACG CCTTCGGGGC GGCCCACAGG GCCCACGCCA CCACCGTGGG GGTCGCCGAG
CGGCTGCCCG CCGCCGCCGG CTTCCTGCTG GAGCAGGAGC TGGACTACCT GGATGGGGTG
CTGCGCAGCC CGGAGCGGCC CTTCGTGGCC ATCCTCGGCG GGGCCAAGGT CTCGGACAAG
CTGGGGGTCA TCGAGAGCCT GCTCGGGGTG GCCGACCGCC TCCTCGTCGG GGGGGCGATG
TGCTTCACCT TCCTGAAGGC CAGGGGCCTC GGGGTCGGAG CCTCGCTGGT CGAGGACGAC
TACCTCGGGG AGGCGCGTCG CCTCATGGAG GGGGCCGCCG ACAGGCTCGT GCTCCCGGTG
GACGTGGTCG TCGCCGAGAG GATGGAGGAG GGGGCCCGGA CCCGGACCGT CCCGGTGGAG
GAGATCCCGG AGGGCTGGAT GGGCCTGGAC ATCGGCCCCC GGACGGTCGA GCTCTTCCGC
CGGCACATCC TGCAGGCCAG GACCATCTTC TGGAACGGCC CCATGGGGGT CTTCGAGATC
GACGCGTTCG CCAGGGGCAC CGAGGGCGTG GCCAGGGCCG TCGCCGAGAG CGGGGCCACG
AGCGTCGTGG GGGGCGGCGA CTCGGTCGCC GCCGTCAGGA AGCTCGGCCT GGAGGACAGG
ATGAGCCACA TCTCCACCGG CGGCGGGGCC TCGCTGGAGT ACGTCGAGGG CAGGGAGCTG
CCCGGCGTGG CCGTGCTGCC CGAGAGGGAG GAGGTCTAG
 
Protein sequence
MDKRSVRDLE LRGKKVLVRV DFNVPVKGGE VTDDTRIRRA LPTIRYLLQR GARVALISHL 
GRPKGEPDPR YRMDPVARRL EELLGEPVRK LDTATGPEVG RALEELERGV ILLENSRFYP
GETKNDPAFA AELAGPFDLY VNDAFGAAHR AHATTVGVAE RLPAAAGFLL EQELDYLDGV
LRSPERPFVA ILGGAKVSDK LGVIESLLGV ADRLLVGGAM CFTFLKARGL GVGASLVEDD
YLGEARRLME GAADRLVLPV DVVVAERMEE GARTRTVPVE EIPEGWMGLD IGPRTVELFR
RHILQARTIF WNGPMGVFEI DAFARGTEGV ARAVAESGAT SVVGGGDSVA AVRKLGLEDR
MSHISTGGGA SLEYVEGREL PGVAVLPERE EV